RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA971676", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA971676 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29646570 29646570 PRJNA971676_P_NODE_11150_length_275_cov_1.455446_g11061_i0 PRJNA971676 11150 275 1.455446 4.0024765 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 64.7 8.03e-10   NR ADF47447.1 6161 g11061 i0 43.3 1.46181818181818 67 36 72 2 208 11 106 171 ADF47447.1 TIA1-like protein [Dugesia japonica] diamond 402 64.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
29874351 29874351 PRJNA971676_P_NODE_12591_length_262_cov_1.111111_g12502_i0 PRJNA971676 12591 262 1.111111 2.91111082 Metazoa 33208 Platyhelminthes Platyhelminthes 83.2 1.24e-17   NR KAF6768187.1 100269 g12502 i0 48.2 3.70992366412214 83 35 95 3 257 9 73 147 KAF6768187.1 hypothetical protein AHF37_06258 [Paragonimus kellicotti] diamond 972 83.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus kellicotti
30695695 30695695 PRJNA971676_P_NODE_21513_length_243_cov_0.905882_g21424_i0 PRJNA971676 21513 243 0.905882 2.20129326 Opisthokonta 33154 Platyhelminthes Platyhelminthes 67.8 5.66e-11   NR PAA76717.1 282301 g21424 i0 53.8 4.66666666666667 52 24 64.2 0 4 159 508 559 PAA76717.1 hypothetical protein BOX15_Mlig021680g2, partial [Macrostomum lignano] diamond 1134 68.2 0.994134897360704 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;