RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA971676", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA971676 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30531402 30531402 PRJNA971676_P_NODE_13053_length_257_cov_1.983696_g12964_i0 PRJNA971676 13053 257 1.983696 5.09809872 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 79.3 5.8e-15   NR KAI9183267.1 1313167 g12964 i0 52.4 1.73929961089494 82 34 94.6 2 4 246 221 298 KAI9183267.1 Protein phosphatase PP2A regulatory subunit B [Blastocladiella emersonii ATCC 22665] diamond 447 79.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
31543020 31543020 PRJNA971676_P_NODE_22056_length_242_cov_0.911243_g21967_i0 PRJNA971676 22056 242 0.911243 2.20520806 Allomyces arbusculus 64504 Fungi Fungi 114 3.5200000000000003e-29   NR KAJ3366916.1 64504 g21967 i0 68.8 17.801652892562 77 24 95.5 0 242 12 42 118 KAJ3366916.1 40S ribosomal protein S6 [Allomyces arbusculus] diamond 4308 114 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;