RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA971676", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA971676 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27151961 27151961 PRJNA971676_P_NODE_16362_length_249_cov_0.875000_g16273_i0 PRJNA971676 16362 249 0.875 2.17875 Armatimonadota bacterium 2033014 Bacteria Bacteria 117 6.59e-29   NR MBM3464694.1 2033014 g16273 i0 71.8 3.75903614457831 78 22 94 0 248 15 370 447 MBM3464694.1 aspartate aminotransferase family protein [Armatimonadota bacterium] diamond 936 117 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28232143 28232143 PRJNA971676_P_NODE_3246_length_436_cov_2.520661_g3157_i0 PRJNA971676 3246 436 2.520661 10.99008196 Bacillati 1783272 Bacteria Bacteria 54.7 1.63e-5   NR WP_395138970.1 1872638 g3157 i0 50 1.03899082568807 62 28 42.7 2 356 171 237 295 WP_395138970.1 collagen-binding domain-containing protein [Armatimonas sp.] diamond 453 54.7 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;