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contig_metadata

30 rows where bioproject = "PRJNA971676" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 30 ✖

bioproject 1

  • PRJNA971676 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
944626 944626 PRJNA971676_P_NODE_18741_length_246_cov_0.890173_g18652_i0 PRJNA971676 18741 246 0.890173 2.18982558 Chlorophyta 3041 Plants Plants 124 2.5099999999999996e-31   NR PSC68752.1 554055 g18652 i0 65.9 13 82 28 100 0 1 246 116 197 PSC68752.1 H ACA ribonucleo complex subunit 4 [Micractinium conductrix] diamond 3198 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
2542059 2542059 PRJNA971676_P_NODE_1542_length_603_cov_1.679245_g1455_i0 PRJNA971676 1542 603 1.679245 10.12584735 root 1 Root_unresolved Root_unresolved 222 1.0899999999999999e-68   NR AEO44580.1 3046 g1455 i0 56.2 18.2587064676617 194 73 96.5 4 603 22 136 317 AEO44580.1 receptor for activated C kinase 1 [Dunaliella salina] diamond 11010 224 0.991071428571429 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
4772950 4772950 PRJNA971676_P_NODE_18024_length_247_cov_0.885057_g17935_i0 PRJNA971676 18024 247 0.885057 2.18609079 Coccomyxa viridis 1274662 Plants Plants 113 3.33e-29   NR CAK0764924.1 1274662 g17935 i0 74 13.4210526315789 73 19 88.7 0 28 246 1 73 CAK0764924.1 60S ribosomal protein L19C [Coccomyxa viridis] diamond 3315 113 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
8597580 8597580 PRJNA971676_P_NODE_18527_length_246_cov_0.890173_g18438_i0 PRJNA971676 18527 246 0.890173 2.18982558 Pandorina colemaniae 47786 Plants Plants 56.5 0.002   NTclustered gi|1808706855|gb|MH511724.1| 47786 g18438 i0 94.444 0.146341463414634 36 2 15 0 7 42 302 267 Pandorina colemaniae photosystem II protein L (psbL), photosystem II cytochrome b559 beta subunit (psbF), beta subunit of RNA polymerase (rpoBb), beta subunit of RNA polymerase (rpoBa), cytochrome b6/f complex subunit 4 (petD), and protochlorophyllide reductase subunit B (chlB) genes, complete cds; plastid blastn 36 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Pandorina Pandorina colemaniae
8919416 8919416 PRJNA971676_P_NODE_7487_length_320_cov_1.696356_g7398_i0 PRJNA971676 7487 320 1.696356 5.4283392 Coccomyxa sp. Obi 2315456 Plants Plants 93.6 4.94e-22   NR BDA51388.1 2315456 g7398 i0 55.8 0.975 104 43 97.5 2 318 7 3 103 BDA51388.1 40S ribosomal protein S25-4 [Coccomyxa sp. Obi] diamond 312 93.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
14020392 14020392 PRJNA971676_P_NODE_7471_length_320_cov_4.514170_g7382_i0 PRJNA971676 7471 320 4.51417 14.445344 Chlorophyta 3041 Plants Plants 279 1.26e-70   NTclustered gi|926766867|ref|XM_014037032.1| 145388 g7382 i0 85.878 80.928125 262 37 82 0 59 320 1 262 Monoraphidium neglectum Tubulin alpha-1 chain mRNA blastn 25897 279 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
16247447 16247447 PRJNA971676_P_NODE_17233_length_248_cov_0.880000_g17144_i0 PRJNA971676 17233 248 0.88 2.1824 Chlamydomonas reinhardtii 3055 Plants Plants 187 5.8899999999999985e-43   NTclustered gi|2082248650|ref|XM_043063418.1| 3055 g17144 i0 85.795 15.7661290322581 176 25 71 0 71 246 605 780 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA blastn 3910 187 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16247644 16247644 PRJNA971676_P_NODE_653_length_871_cov_1.823308_g580_i0 PRJNA971676 653 871 1.823308 15.88101268 Prototheca wickerhamii 3111 Plants Plants 328 3.9799999999999995e-109   NR KAK2077087.1 3111 g580 i0 62.1 1.91848450057405 277 100 95.1 3 42 869 4 276 KAK2077087.1 60S ribosomal protein L5-B [Prototheca wickerhamii] diamond 1671 328 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
17522765 17522765 PRJNA971676_P_NODE_2754_length_469_cov_0.972222_g2665_i0 PRJNA971676 2754 469 0.972222 4.55972118 Chlorophyta 3041 Plants Plants 244 5.79e-78   NR P31692.1 3074 g2665 i0 75.5 14.2196162046908 159 35 99.1 1 3 467 117 275 P31692.1 RecName: Full=ADP,ATP carrier protein; AltName: Full=ADP/ATP translocase; AltName: Full=Adenine nucleotide translocator; Short=ANT [Parachlorella kessleri] diamond 6669 245 0.995918367346939 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
18796298 18796298 PRJNA971676_P_NODE_1175_length_678_cov_1.674380_g1089_i0 PRJNA971676 1175 678 1.67438 11.3522964 Chlorophyta 3041 Plants Plants 300 9.4e-98   NR KAK2076738.1 3111 g1089 i0 65.8 14.8274336283186 222 75 98.2 1 666 1 1 221 KAK2076738.1 Arp2/3 complex subunit, actin nucleation center [Prototheca wickerhamii] diamond 10053 301 0.996677740863787 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
18796618 18796618 PRJNA971676_P_NODE_8035_length_311_cov_1.617647_g7946_i0 PRJNA971676 8035 311 1.617647 5.03088217 Chlorellaceae 35461 Plants Plants 139 1.67e-37   NR PSC67868.1 554055 g7946 i0 68.7 3.68488745980707 99 31 95.5 0 297 1 21 119 PSC67868.1 ADP,ATP carrier [Micractinium conductrix] diamond 1146 140 0.992857142857143 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
21346872 21346872 PRJNA971676_P_NODE_7237_length_324_cov_1.880478_g7148_i0 PRJNA971676 7237 324 1.880478 6.09274872 Auxenochlorella protothecoides 3075 Plants Plants 130 1.37e-25   NTclustered gi|760445578|ref|XM_011401556.1| 3075 g7148 i0 88.679 2.55246913580247 106 12 33 0 181 286 105 210 Auxenochlorella protothecoides 40S ribosomal protein S11 partial mRNA blastn 827 130 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
22621842 22621842 PRJNA971676_P_NODE_2578_length_480_cov_2.368550_g2489_i0 PRJNA971676 2578 480 2.36855 11.36904 Eukaryota 2759 Plants Plants 103 3.72e-25   NR KAK2080961.1 3111 g2489 i0 54.2 3.6625 118 54 73.8 0 446 93 6 123 KAK2080961.1 60S ribosomal protein L35-4 [Prototheca wickerhamii] diamond 1758 103 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
26810725 26810725 PRJNA971676_P_NODE_18281_length_246_cov_1.277457_g18192_i0 PRJNA971676 18281 246 1.277457 3.14254422 Eukaryota 2759 Plants Plants 139 8.02e-39   NR XP_011402198.1 3075 g18192 i0 80.2 165.939024390244 81 16 98.8 0 245 3 7 87 XP_011402198.1 40S ribosomal protein S4-3 [Auxenochlorella protothecoides] diamond 40821 140 0.992857142857143 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
27000386 27000386 PRJNA971676_P_NODE_16262_length_249_cov_0.875000_g16173_i0 PRJNA971676 16262 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 71.6 2.06e-12   NR KAJ9521816.1 44745 g16173 i0 63.6 3.13253012048193 44 16 53 0 1 132 294 337 KAJ9521816.1 hypothetical protein QJQ45_024671 [Haematococcus lacustris] diamond 780 71.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
27278930 27278930 PRJNA971676_P_NODE_15763_length_249_cov_0.875000_g15674_i0 PRJNA971676 15763 249 0.875 2.17875 Micractinium sp. CCAP 211/92 554058 Plants Plants 134 1.75e-37   NR KAL4420073.1 554058 g15674 i0 88.3 1.91566265060241 77 9 92.8 0 233 3 66 142 KAL4420073.1 hypothetical protein ABPG77_004338 [Micractinium sp. CCAP 211/92] diamond 477 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium sp. CCAP 211/92
28542110 28542110 PRJNA971676_P_NODE_12967_length_258_cov_1.616216_g12878_i0 PRJNA971676 12967 258 1.616216 4.16983728 Polytomella parva 51329 Plants Plants 127 3.5500000000000004e-33   NR QKY14960.1 51329 g12878 i0 74.1 1.97674418604651 85 22 98.8 0 3 257 238 322 QKY14960.1 pyruvate dehydrogenase E1 component subunit alpha - subunit beta (PDh-E1 BETA) [Polytomella parva] diamond 510 127 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella parva
28920618 28920618 PRJNA971676_P_NODE_1228_length_663_cov_1.271186_g1142_i0 PRJNA971676 1228 663 1.271186 8.42796318 Coccomyxa subellipsoidea C-169 574566 Plants Plants 248 4.21e-77   NR XP_005645852.1 574566 g1142 i0 58 0.936651583710407 207 87 93.7 0 658 38 4 210 XP_005645852.1 glutathione S-transferase [Coccomyxa subellipsoidea C-169] diamond 621 248 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
28920621 28920621 PRJNA971676_P_NODE_15428_length_250_cov_0.870056_g15339_i0 PRJNA971676 15428 250 0.870056 2.17514 Tetradesmus obliquus 3088 Plants Plants 156 3.94e-43   NR WIA39445.1 3088 g15339 i0 92.3 2.808 78 6 93.6 0 16 249 11 88 WIA39445.1 hypothetical protein OEZ86_005546 [Tetradesmus obliquus] diamond 702 156 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29205118 29205118 PRJNA971676_P_NODE_16929_length_248_cov_0.880000_g16840_i0 PRJNA971676 16929 248 0.88 2.1824 Chlorella variabilis 554065 Plants Plants 48.9 2.66e-4   NR XP_005848189.1 554065 g16840 i0 41.9 0.75 62 34 72.6 1 246 67 260 321 XP_005848189.1 hypothetical protein CHLNCDRAFT_22706 [Chlorella variabilis] diamond 186 48.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
29400657 29400657 PRJNA971676_P_NODE_11589_length_271_cov_1.555556_g11500_i0 PRJNA971676 11589 271 1.555556 4.21555676 Eukaryota 2759 Plants Plants 69.3 2.32e-11   NR KAK9907581.1 248742 g11500 i0 46.7 3.9409594095941 90 44 98.5 2 269 3 861 947 KAK9907581.1 hypothetical protein WJX75_006405 [Coccomyxa subellipsoidea] diamond 1068 69.7 0.994261119081779 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
29425762 29425762 PRJNA971676_P_NODE_8509_length_305_cov_0.995690_g8420_i0 PRJNA971676 8509 305 0.99569 3.0368545 Pleodorina starrii 330485 Plants Plants 47.4 0.00138   NR GLC65464.1 330485 g8420 i0 41.9 1.21967213114754 62 32 61 2 246 61 77 134 GLC65464.1 hypothetical protein PLESTF_000296400 [Pleodorina starrii] diamond 372 47.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Pleodorina Pleodorina starrii
29836376 29836376 PRJNA971676_P_NODE_4131_length_397_cov_1.290123_g4042_i0 PRJNA971676 4131 397 1.290123 5.12178831 Chlamydomonas eustigma 1157962 Plants Plants 48.1 0.00262   NR GAX79527.1 1157962 g4042 i0 39.6 1.46599496221662 53 32 40.1 0 396 238 580 632 GAX79527.1 hypothetical protein CEUSTIGMA_g6968.t1 [Chlamydomonas eustigma] diamond 582 48.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
29969023 29969023 PRJNA971676_P_NODE_3071_length_448_cov_0.821333_g2982_i0 PRJNA971676 3071 448 0.821333 3.67957184 Eukaryota 2759 Plants Plants 107 7.750000000000001e-27   NR PRW20673.1 3076 g2982 i0 60.4 5.53125 96 38 64.3 0 35 322 7 102 PRW20673.1 40S ribosomal S25-3 [Chlorella sorokiniana] diamond 2478 108 0.990740740740741 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30000795 30000795 PRJNA971676_P_NODE_16811_length_248_cov_0.880000_g16722_i0 PRJNA971676 16811 248 0.88 2.1824 Chlamydomonadales 3042 Plants Plants 80.1 1.26e-16   NR XP_002949139.1 3068 g16722 i0 61.3 3.01209677419355 62 24 75 0 56 241 3 64 XP_002949139.1 component of cytosolic 80S ribosome and 60S large subunit [Volvox carteri f. nagariensis] diamond 747 80.9 0.990111248454882 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
30026142 30026142 PRJNA971676_P_NODE_22851_length_241_cov_1.452381_g22762_i0 PRJNA971676 22851 241 1.452381 3.50023821 Haematococcus lacustris 44745 Plants Plants 142 4.38e-37   NR KAJ9515456.1 44745 g22762 i0 81 5.88796680497925 79 15 98.3 0 3 239 485 563 KAJ9515456.1 hypothetical protein QJQ45_016457 [Haematococcus lacustris] diamond 1419 142 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
30089095 30089095 PRJNA971676_P_NODE_10232_length_284_cov_1.526066_g10143_i0 PRJNA971676 10232 284 1.526066 4.33402744 Haematococcus lacustris 44745 Plants Plants 71.2 1.65e-12   NR KAJ9523138.1 44745 g10143 i0 38.7 0.982394366197183 93 46 86.6 2 38 283 1 93 KAJ9523138.1 hypothetical protein QJQ45_023872 [Haematococcus lacustris] diamond 279 71.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
30190121 30190121 PRJNA971676_P_NODE_9592_length_290_cov_1.419355_g9503_i0 PRJNA971676 9592 290 1.419355 4.1161295 root 1 Root_unresolved Root_unresolved 109 1.92e-25   NR PRW39060.1 3076 g9503 i0 58 15.8793103448276 88 37 91 0 268 5 442 529 PRW39060.1 abc transporter G family [Chlorella sorokiniana] diamond 4605 110 0.990909090909091 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30342474 30342474 PRJNA971676_P_NODE_11712_length_270_cov_1.563452_g11623_i0 PRJNA971676 11712 270 1.563452 4.2213204 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 72 8.74e-13   NR KAF6253424.1 2650976 g11623 i0 53.8 1.71111111111111 65 30 72.2 0 199 5 89 153 KAF6253424.1 flagellar associated protein [Scenedesmus sp. NREL 46B-D3] diamond 462 72 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
31043626 31043626 PRJNA971676_P_NODE_12315_length_264_cov_1.612565_g12226_i0 PRJNA971676 12315 264 1.612565 4.2571716 Eukaryota 2759 Plants Plants 133 7.87e-34   NR KAL4858421.1 3077 g12226 i0 75.6 29.4659090909091 86 21 97.7 0 262 5 85 170 KAL4858421.1 40S ribosomal protein S4 [Chlorella vulgaris] diamond 7779 134 0.992537313432836 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;