RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA971676", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA971676 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11148228 11148228 PRJNA971676_P_NODE_18229_length_246_cov_1.687861_g18140_i0 PRJNA971676 18229 246 1.687861 4.15213806 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 350 7.04e-92   NTclustered gi|238617605|gb|FJ973380.1| 45107 g18140 i0 92.276 93.5772357723577 246 19 100 0 1 246 1578 1333 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 23020 350 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
27057596 27057596 PRJNA971676_P_NODE_13262_length_255_cov_2.406593_g13173_i0 PRJNA971676 13262 255 2.406593 6.13681215 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 84.7 1.09e-18   NR MES1916894.1 1215613 g13173 i0 45 0.941176470588235 80 44 94.1 0 242 3 57 136 MES1916894.1 hypothetical protein [Cercozoa sp. M6MM] diamond 240 84.7 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30089101 30089101 PRJNA971676_P_NODE_7172_length_325_cov_1.730159_g7083_i0 PRJNA971676 7172 325 1.730159 5.62301675 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 92.4 3.65e-19   NR MES1914898.1 1215613 g7083 i0 67.2 1.19076923076923 64 21 59.1 0 325 134 773 836 MES1914898.1 hypothetical protein [Cercozoa sp. M6MM] diamond 387 92.4 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;