RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA971676", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA971676 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28131606 28131606 PRJNA971676_P_NODE_605_length_900_cov_2.946796_g534_i0 PRJNA971676 605 900 2.946796 26.521164 Kipferlia bialata 797122 Fornicata other_Eukaryota 52.4 0.00208   NR GIQ80334.1 797122 g534 i0 27.3 0.683333333333333 205 129 62.3 7 664 104 719 921 GIQ80334.1 hypothetical protein KIPB_001114, partial [Kipferlia bialata] diamond 615 52.4 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
28952616 28952616 PRJNA971676_P_NODE_15988_length_249_cov_0.875000_g15899_i0 PRJNA971676 15988 249 0.875 2.17875 Kipferlia bialata 797122 Fornicata other_Eukaryota 105 1.31e-24   NR GIQ82379.1 797122 g15899 i0 53.7 0.987951807228916 82 38 98.8 0 2 247 43 124 GIQ82379.1 myo-inositol-1-phosphate synthase [Kipferlia bialata] diamond 246 105 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;