RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA971676", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA971676 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31353198 31353198 PRJNA971676_P_NODE_15936_length_249_cov_0.875000_g15847_i0 PRJNA971676 15936 249 0.875 2.17875 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 98.2 1.2300000000000002e-21   NR MBM3235868.1 2026781 g15847 i0 56.1 0.987951807228916 82 36 98.8 0 2 247 990 1071 MBM3235868.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 246 98.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31701090 31701090 PRJNA971676_P_NODE_7457_length_321_cov_0.935484_g7368_i0 PRJNA971676 7457 321 0.935484 3.00290364 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 169 7.149999999999998e-48   NR MFQ6042961.1 2026781 g7368 i0 73.6 3.96261682242991 106 28 99.1 0 319 2 234 339 MFQ6042961.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 1272 169 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;