RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA971676" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA971676 · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17522559 17522559 PRJNA971676_P_NODE_1174_length_678_cov_3.011570_g1088_i0 PRJNA971676 1174 678 3.01157 20.4184446 Thecamonas trahens 529818 Root_unresolved Root_unresolved 329 2.79e-85   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g1088 i0 78.652 24.2625368731563 534 86 76 21 108 624 198 720 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 16450 329 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27316898 27316898 PRJNA971676_P_NODE_9163_length_296_cov_1.381166_g9074_i0 PRJNA971676 9163 296 1.381166 4.08825136 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 86.7 9.21e-19   NR XP_013755759.1 461836 g9074 i0 52 1.52027027027027 75 36 76 0 67 291 1 75 XP_013755759.1 uncharacterized protein AMSG_08003 [Thecamonas trahens ATCC 50062] diamond 450 86.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28573413 28573413 PRJNA971676_P_NODE_13887_length_251_cov_0.865169_g13798_i0 PRJNA971676 13887 251 0.865169 2.17157419 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 67.8 5.98e-11   NR XP_013755586.1 461836 g13798 i0 41.5 0.9800796812749 82 46 98 1 6 251 228 307 XP_013755586.1 pregnancy-associated glycoprotein 6 [Thecamonas trahens ATCC 50062] diamond 246 67.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31226479 31226479 PRJNA971676_P_NODE_13955_length_251_cov_0.865169_g13866_i0 PRJNA971676 13955 251 0.865169 2.17157419 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 44.3 0.0115   NR XP_013757229.1 461836 g13866 i0 43.4 0.633466135458167 53 30 63.3 0 77 235 139 191 XP_013757229.1 NOD3 protein [Thecamonas trahens ATCC 50062] diamond 159 44.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;