RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA971593", tax_phylum = "Thermoplasmatota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA971593 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25170341 25170341 PRJNA971593_P_NODE_17280_length_287_cov_1.079439_g17131_i0 PRJNA971593 17280 287 1.079439 3.09798993 Archaea 2157 Archaea Archaea 143 1.2899999999999999e-38   NR MCD6171401.1 1906666 g17131 i0 67.8 7.57839721254355 90 29 94.1 0 16 285 228 317 MCD6171401.1 ATPase [Thermoplasmata archaeon] diamond 2175 143 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28952595 28952595 PRJNA971593_P_NODE_22468_length_251_cov_0.865169_g22319_i0 PRJNA971593 22468 251 0.865169 2.17157419 Thermoplasmata archaeon 1906666 Archaea Archaea 61.6 3.97e-9   NR RLF32264.1 1906666 g22319 i0 45.3 0.896414342629482 75 41 89.6 0 225 1 41 115 RLF32264.1 MAG: haloacid dehalogenase [Thermoplasmata archaeon] diamond 225 61.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;