RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA971593" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA971593 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3495047 3495047 PRJNA971593_P_NODE_3463_length_649_cov_4.125000_g3319_i0 PRJNA971593 3463 649 4.125 26.77125 Potexvirus cymbidii 3433819 Viruses Viruses 1146 0   NTclustered gi|33309202|gb|AF405722.1| 12178 g3319 i0 98.609 99.5731895223421 647 9 99 0 3 649 656 10 Cymbidium mosaic virus from Aranda Noorah Alsagoff coat protein mRNA, complete cds blastn 64623 1146 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus cymbidii
8597199 8597199 PRJNA971593_P_NODE_20567_length_261_cov_1.223404_g20418_i0 PRJNA971593 20567 261 1.223404 3.19308444 Narcissus common latent virus 160844 Viruses Viruses 179 4.95e-50   NR YP_699983.1 160844 g20418 i0 96.5 0.988505747126437 86 3 98.9 0 3 260 1858 1943 YP_699983.1 RNA-dependent RNA polymerase [Narcissus common latent virus] diamond 258 179 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensnarcissi
14972311 14972311 PRJNA971593_P_NODE_32_length_6254_cov_39.917974_g4_i0 PRJNA971593 32 6254 39.917974 2496.47009396 Potexvirus cymbidii 3433819 Viruses Viruses 10575 0   NTclustered gi|2700566920|gb|PP481412.1| 12178 g4 i0 97.467 35.8629677006716 6197 157 99 0 58 6254 6406 210 Cymbidium mosaic virus isolate IFA191, complete genome blastn 224287 10575 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus cymbidii
21346174 21346174 PRJNA971593_P_NODE_1097_length_1078_cov_1.712438_g1001_i0 PRJNA971593 1097 1078 1.712438 18.46008164 Carlavirus latensnarcissi 3427772 Viruses Viruses 1831 0   NTclustered gi|1620815969|gb|MH182708.1| 160844 g1001 i0 97.83 3.53617810760668 1060 23 98 0 1 1060 1060 1 Narcissus common latent virus isolate N3 clone 3-1 triple gene block protein 3 (TGB3) gene, partial cds; and coat protein (CP) gene, complete cds blastn 3812 1831 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensnarcissi
21346219 21346219 PRJNA971593_P_NODE_14657_length_314_cov_1.273859_g14508_i0 PRJNA971593 14657 314 1.273859 3.99991726 Trichovirus mali 12175 Viruses Viruses 531 3.099999999999999e-146   NTclustered gi|2214905302|gb|OK340218.1| 12175 g14508 i0 97.134 99.3184713375796 314 9 100 0 1 314 6703 6390 Apple chlorotic leaf spot virus isolate DSMZ PV-0998 clone 1, complete genome blastn 31186 531 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
28889121 28889121 PRJNA971593_P_NODE_3208_length_672_cov_1.308848_g3065_i0 PRJNA971593 3208 672 1.308848 8.79545856 Narcissus common latent virus 160844 Viruses Viruses 396 3.95e-138   NR YP_699984.1 160844 g3065 i0 85.1 0.991071428571429 222 33 99.1 0 670 5 6 227 YP_699984.1 Triple Gene Block protein 1 [Narcissus common latent virus] diamond 666 396 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensnarcissi
32681020 32681020 PRJNA971593_P_NODE_20640_length_260_cov_1.379679_g20491_i0 PRJNA971593 20640 260 1.379679 3.5871654 Narcissus common latent virus 160844 Viruses Viruses 171 4.569999999999999e-47   NR YP_699983.1 160844 g20491 i0 96.5 0.992307692307692 86 3 99.2 0 260 3 1528 1613 YP_699983.1 RNA-dependent RNA polymerase [Narcissus common latent virus] diamond 258 171 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensnarcissi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;