contig_metadata
18 rows where bioproject = "PRJNA971593", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4772640 | 4772640 | PRJNA971593_P_NODE_25904_length_246_cov_0.890173_g25755_i0 | PRJNA971593 | 25904 | 246 | 0.890173 | 2.18982558 | Bdellovibrionota | 3018035 | Bacteria | Bacteria | 120 | 4.71e-30 | NR | MBS1959460.1 | 2053517 | g25755 | i0 | 74.7 | 3.5609756097561 | 79 | 19 | 96.3 | 1 | 7 | 243 | 128 | 205 | MBS1959460.1 methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO [Bdellovibrionales bacterium] | diamond | 876 | 121 | 0.991735537190083 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 18796013 | 18796013 | PRJNA971593_P_NODE_19535_length_269_cov_1.178571_g19386_i0 | PRJNA971593 | 19535 | 269 | 1.178571 | 3.17035599 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 139 | 1.48e-39 | NR | MCB0394868.1 | 2053517 | g19386 | i0 | 73 | 1.98513011152416 | 89 | 24 | 99.3 | 0 | 1 | 267 | 3 | 91 | MCB0394868.1 peroxiredoxin [Bdellovibrionales bacterium] | diamond | 534 | 139 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 26867934 | 26867934 | PRJNA971593_P_NODE_17121_length_288_cov_1.195349_g16972_i0 | PRJNA971593 | 17121 | 288 | 1.195349 | 3.44260512 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 73.2 | 1.03e-12 | NR | MCB0386755.1 | 2053517 | g16972 | i0 | 44.6 | 0.958333333333333 | 92 | 36 | 86.5 | 5 | 27 | 275 | 285 | 370 | MCB0386755.1 C1 family peptidase [Bdellovibrionales bacterium] | diamond | 276 | 73.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 27437052 | 27437052 | PRJNA971593_P_NODE_3663_length_632_cov_1.377460_g3519_i0 | PRJNA971593 | 3663 | 632 | 1.37746 | 8.7055472 | Halobacteriovoraceae bacterium | 2026745 | Bacteria | Bacteria | 91.3 | 1.2e-17 | NR | MCB9093311.1 | 2026745 | g3519 | i0 | 36 | 0.816455696202532 | 172 | 95 | 81.6 | 3 | 115 | 630 | 32 | 188 | MCB9093311.1 hypothetical protein [Halobacteriovoraceae bacterium] | diamond | 516 | 91.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Halobacteriovoraceae | Halobacteriovoraceae bacterium | |||
| 27500027 | 27500027 | PRJNA971593_P_NODE_103_length_2519_cov_21.611611_g63_i0 | PRJNA971593 | 103 | 2519 | 21.611611 | 544.39648109 | Bacteriovoracales bacterium | 2497611 | Bacteria | Bacteria | 72 | 1.05e-8 | NR | MDC0253985.1 | 2497611 | g63 | i0 | 37.5 | 0.123858674077015 | 104 | 56 | 11.3 | 2 | 515 | 231 | 737 | 840 | MDC0253985.1 hypothetical protein [Bacteriovoracales bacterium] | diamond | 312 | 72 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracales bacterium | ||||
| 27790512 | 27790512 | PRJNA971593_P_NODE_26864_length_244_cov_0.900585_g26715_i0 | PRJNA971593 | 26864 | 244 | 0.900585 | 2.1974274 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 107 | 6.63e-25 | NR | MBC7659705.1 | 1971216 | g26715 | i0 | 56.6 | 5.7172131147541 | 76 | 33 | 93.4 | 0 | 243 | 16 | 156 | 231 | MBC7659705.1 hypothetical protein [Oligoflexus sp.] | diamond | 1395 | 107 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. | ||
| 27973565 | 27973565 | PRJNA971593_P_NODE_25985_length_246_cov_0.890173_g25836_i0 | PRJNA971593 | 25985 | 246 | 0.890173 | 2.18982558 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 62.8 | 3.3e-9 | NR | MEK6705120.1 | 3034175 | g25836 | i0 | 40.3 | 1.95121951219512 | 77 | 44 | 91.5 | 1 | 227 | 3 | 267 | 343 | MEK6705120.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase [Bdellovibrionota bacterium] | diamond | 480 | 62.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 28225859 | 28225859 | PRJNA971593_P_NODE_13006_length_334_cov_1.475096_g12857_i0 | PRJNA971593 | 13006 | 334 | 1.475096 | 4.92682064 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 93.6 | 4.25e-21 | NR | MBX9767865.1 | 2053517 | g12857 | i0 | 43 | 0.961077844311377 | 107 | 61 | 96.1 | 0 | 321 | 1 | 22 | 128 | MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 321 | 93.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28358582 | 28358582 | PRJNA971593_P_NODE_10966_length_365_cov_1.352740_g10817_i0 | PRJNA971593 | 10966 | 365 | 1.35274 | 4.937501 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 106 | 2.89e-25 | NR | MAF98313.1 | 2024841 | g10817 | i0 | 51.4 | 4.47123287671233 | 105 | 46 | 86.3 | 1 | 49 | 363 | 27 | 126 | MAF98313.1 hypothetical protein [Micavibrio sp.] | diamond | 1632 | 106 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio sp. | ||
| 28605067 | 28605067 | PRJNA971593_P_NODE_9347_length_397_cov_1.422840_g9198_i0 | PRJNA971593 | 9347 | 397 | 1.42284 | 5.6486748 | Fluviispira multicolorata | 2654512 | Bacteria | Bacteria | 64.3 | 6.16e-9 | NR | WP_152212914.1 | 2654512 | g9198 | i0 | 53.6 | 0.423173803526448 | 56 | 26 | 42.3 | 0 | 169 | 2 | 409 | 464 | WP_152212914.1 ABC transporter transmembrane domain-containing protein [Fluviispira multicolorata] | diamond | 168 | 64.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Fluviispira | Fluviispira multicolorata | ||
| 29488926 | 29488926 | PRJNA971593_P_NODE_16370_length_295_cov_1.040541_g16221_i0 | PRJNA971593 | 16370 | 295 | 1.040541 | 3.06959595 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 87.4 | 5.44e-20 | NR | MCB0368288.1 | 2053517 | g16221 | i0 | 42.9 | 1.91186440677966 | 91 | 52 | 92.5 | 0 | 293 | 21 | 9 | 99 | MCB0368288.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 564 | 87.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29741429 | 29741429 | PRJNA971593_P_NODE_27850_length_243_cov_0.905882_g27701_i0 | PRJNA971593 | 27850 | 243 | 0.905882 | 2.20129326 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 57 | 3.21e-7 | NR | MBT3982485.1 | 2081706 | g27701 | i0 | 40.6 | 1.5679012345679 | 69 | 41 | 85.2 | 0 | 239 | 33 | 48 | 116 | MBT3982485.1 fatty acid desaturase [Bacteriovoracaceae bacterium] | diamond | 381 | 57 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 29962823 | 29962823 | PRJNA971593_P_NODE_24911_length_247_cov_0.885057_g24762_i0 | PRJNA971593 | 24911 | 247 | 0.885057 | 2.18609079 | Oligoflexus sp. | 1971216 | Bacteria | Bacteria | 43.9 | 0.0155 | NR | WP_324957648.1 | 1971216 | g24762 | i0 | 32.9 | 1.68825910931174 | 85 | 49 | 97.2 | 2 | 2 | 241 | 288 | 369 | WP_324957648.1 SpoIIE family protein phosphatase [Oligoflexus sp.] | diamond | 417 | 43.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. | ||
| 30279082 | 30279082 | PRJNA971593_P_NODE_22512_length_251_cov_0.865169_g22363_i0 | PRJNA971593 | 22512 | 251 | 0.865169 | 2.17157419 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 121 | 2.32e-31 | NR | MBA2406307.1 | 2053517 | g22363 | i0 | 62.7 | 0.99203187250996006 | 83 | 31 | 99.2 | 0 | 1 | 249 | 182 | 264 | MBA2406307.1 threonylcarbamoyl-AMP synthase [Bdellovibrionales bacterium] | diamond | 249 | 121 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 30531368 | 30531368 | PRJNA971593_P_NODE_13313_length_330_cov_1.241245_g13164_i0 | PRJNA971593 | 13313 | 330 | 1.241245 | 4.0961085 | Silvanigrellales bacterium | 2767476 | Bacteria | Bacteria | 56.6 | 1.05e-6 | NR | MCA2961696.1 | 2767476 | g13164 | i0 | 65.7 | 2.2 | 35 | 12 | 31.8 | 0 | 261 | 157 | 240 | 274 | MCA2961696.1 DUF1295 domain-containing protein [Silvanigrellales bacterium] | diamond | 726 | 56.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellales bacterium | ||||
| 31384901 | 31384901 | PRJNA971593_P_NODE_5776_length_506_cov_1.066975_g5628_i0 | PRJNA971593 | 5776 | 506 | 1.066975 | 5.3988935 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 185 | 4.25e-56 | NR | MBX9767865.1 | 2053517 | g5628 | i0 | 89.2 | 0.604743083003953 | 102 | 11 | 60.5 | 0 | 308 | 3 | 1 | 102 | MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 306 | 185 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32055248 | 32055248 | PRJNA971593_P_NODE_15238_length_307_cov_1.363248_g15089_i0 | PRJNA971593 | 15238 | 307 | 1.363248 | 4.18517136 | Fluviispira | 2698753 | Bacteria | Bacteria | 76.3 | 7.29e-14 | NR | MBX9703292.1 | 2654442 | g15089 | i0 | 50 | 2.07166123778502 | 72 | 36 | 70.4 | 0 | 216 | 1 | 47 | 118 | MBX9703292.1 CDP-diacylglycerol--serine O-phosphatidyltransferase [Silvanigrellaceae bacterium] | diamond | 636 | 76.6 | 0.996083550913838 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrellaceae bacterium | |||
| 32555602 | 32555602 | PRJNA971593_P_NODE_13119_length_333_cov_0.988462_g12970_i0 | PRJNA971593 | 13119 | 333 | 0.988462 | 3.29157846 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 106 | 3.4e-26 | NR | MBX9767865.1 | 2053517 | g12970 | i0 | 45 | 1 | 111 | 60 | 99.1 | 1 | 4 | 333 | 1 | 111 | MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] | diamond | 333 | 106 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;