RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA971593", tax_kingdom = "Orthornavirae" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 5 ✖

tax_kingdom 1

  • Orthornavirae · 5 ✖

bioproject 1

  • PRJNA971593 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7322361 7322361 PRJNA971593_P_NODE_25946_length_246_cov_0.890173_g25797_i0 PRJNA971593 25946 246 0.890173 2.18982558 Nepovirus cycas 3047785 Viruses Viruses 344 3.27e-90   NTclustered gi|2177483621|gb|MW328844.1| 173976 g25797 i0 91.87 23.3658536585366 246 20 100 0 1 246 3979 4224 Cycas necrotic stunt virus isolate AK 50 segment RNA2 polyprotein gene, complete cds blastn 5748 344 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Nepovirus cycas
20070985 20070985 PRJNA971593_P_NODE_26456_length_245_cov_0.895349_g26307_i0 PRJNA971593 26456 245 0.895349 2.19360505 Nepovirus cycas 3047785 Viruses Viruses 398 2.47e-106   NTclustered gi|2177483507|gb|MW328855.1| 173976 g26307 i0 95.918 23.865306122449 245 10 100 0 1 245 3967 4211 Cycas necrotic stunt virus isolate NY 33 segment RNA1 polyprotein gene, partial cds blastn 5847 398 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Nepovirus cycas
29899732 29899732 PRJNA971593_P_NODE_18151_length_280_cov_1.115942_g18002_i0 PRJNA971593 18151 280 1.115942 3.1246376 Comovirinae sp. 2767531 Viruses Viruses 164 1.15e-44   NR QNN26328.1 2767531 g18002 i0 98.9 0.985714285714286 92 1 98.6 0 278 3 402 493 QNN26328.1 polyprotein [Comovirinae sp.] diamond 276 164 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae   Comovirinae sp.
30942391 30942391 PRJNA971593_P_NODE_21414_length_254_cov_1.591160_g21265_i0 PRJNA971593 21414 254 1.59116 4.0415464 Wufeng shrew iflavirus 7 3084803 Viruses Viruses 89.7 1.28e-18   NR WPV63249.1 3084803 g21265 i0 50 0.992125984251969 84 42 99.2 0 1 252 2385 2468 WPV63249.1 MAG: polyprotein [Wufeng shrew iflavirus 7] diamond 252 89.7 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Wufeng shrew iflavirus 7
31511450 31511450 PRJNA971593_P_NODE_1036_length_1101_cov_1.546693_g940_i0 PRJNA971593 1036 1101 1.546693 17.02908993 Comovirinae sp. 2767531 Viruses Viruses 660 6.97e-230   NR QNN26327.1 2767531 g940 i0 94.2 0.942779291553134 346 20 94.3 0 1038 1 542 887 QNN26327.1 polyprotein 2 [Comovirinae sp.] diamond 1038 660 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae   Comovirinae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;