RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA971593", tax_clade = "Sar" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 12 ✖

tax_clade 1

  • Sar · 12 ✖

bioproject 1

  • PRJNA971593 · 12 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4772705 4772705 PRJNA971593_P_NODE_3464_length_649_cov_2.394097_g3320_i0 PRJNA971593 3464 649 2.394097 15.53768953 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 224 9.1e-71   NR CEP02281.1 37360 g3320 i0 59.3 2.90292758089368 214 67 95.7 4 11 631 1 201 CEP02281.1 hypothetical protein PBRA_008865 [Plasmodiophora brassicae] diamond 1884 226 0.991150442477876 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
6047563 6047563 PRJNA971593_P_NODE_3445_length_650_cov_6.731369_g3301_i0 PRJNA971593 3445 650 6.731369 43.7538985 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 234 1.0299999999999999e-74   NR CEP02281.1 37360 g3301 i0 60.3 0.941538461538462 204 78 94.2 2 14 625 1 201 CEP02281.1 hypothetical protein PBRA_008865 [Plasmodiophora brassicae] diamond 612 234 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
16247258 16247258 PRJNA971593_P_NODE_6113_length_491_cov_4.648325_g5965_i0 PRJNA971593 6113 491 4.648325 22.82327575 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 129 1.05e-34   NR SPQ93437.1 37360 g5965 i0 52.2 2.73116089613035 115 55 70.3 0 458 114 34 148 SPQ93437.1 unnamed protein product [Plasmodiophora brassicae] diamond 1341 129 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
17522224 17522224 PRJNA971593_P_NODE_15454_length_305_cov_0.995690_g15305_i0 PRJNA971593 15454 305 0.99569 3.0368545 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 165 5.28e-45   NR CEP02690.1 37360 g15305 i0 77.2 2.96065573770492 101 23 99.3 0 2 304 244 344 CEP02690.1 hypothetical protein PBRA_002657 [Plasmodiophora brassicae] diamond 903 165 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
21346534 21346534 PRJNA971593_P_NODE_9757_length_389_cov_0.974684_g9608_i0 PRJNA971593 9757 389 0.974684 3.79152076 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 80.9 3.32e-15   NR CEO99240.1 37360 g9608 i0 43.8 0.933161953727506 121 59 93.3 4 24 386 118 229 CEO99240.1 hypothetical protein PBRA_001146 [Plasmodiophora brassicae] diamond 363 80.9 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
22621559 22621559 PRJNA971593_P_NODE_8158_length_426_cov_1.056657_g8009_i0 PRJNA971593 8158 426 1.056657 4.50135882 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 186 4.979999999999999e-54   NR CEP02402.1 37360 g8009 i0 62.4 1.91549295774648 133 50 93.7 0 425 27 260 392 CEP02402.1 hypothetical protein PBRA_008986 [Plasmodiophora brassicae] diamond 816 186 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
27247205 27247205 PRJNA971593_P_NODE_5703_length_509_cov_1.483945_g5555_i0 PRJNA971593 5703 509 1.483945 7.55328005 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 75.9 1.91e-12   NR CEP00208.1 37360 g5555 i0 40.7 0.636542239685658 108 61 63.7 1 2 325 1418 1522 CEP00208.1 hypothetical protein PBRA_007942 [Plasmodiophora brassicae] diamond 324 75.9 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29495374 29495374 PRJNA971593_P_NODE_5430_length_522_cov_1.714922_g5282_i0 PRJNA971593 5430 522 1.714922 8.95189284 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 173 1.92e-51   NR CEP02281.1 37360 g5282 i0 56.6 10.0632183908046 173 72 99.4 2 520 2 6 175 CEP02281.1 hypothetical protein PBRA_008865 [Plasmodiophora brassicae] diamond 5253 173 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30720954 30720954 PRJNA971593_P_NODE_2934_length_695_cov_2.204180_g2793_i0 PRJNA971593 2934 695 2.20418 15.319051 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 85.9 1.75e-16   NR CEO97111.1 37360 g2793 i0 36.1 0.57410071942446 133 65 57.4 1 682 284 1 113 CEO97111.1 hypothetical protein PBRA_005715 [Plasmodiophora brassicae] diamond 399 85.9 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31637692 31637692 PRJNA971593_P_NODE_27256_length_244_cov_0.900585_g27107_i0 PRJNA971593 27256 244 0.900585 2.1974274 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 67 7.84e-12   NR CEO98426.1 37360 g27107 i0 43.4 0.934426229508197 76 40 93.4 1 235 8 39 111 CEO98426.1 hypothetical protein PBRA_006540 [Plasmodiophora brassicae] diamond 228 67 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31732555 31732555 PRJNA971593_P_NODE_14697_length_313_cov_2.566667_g14548_i0 PRJNA971593 14697 313 2.566667 8.03366771 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 123 4.809999999999999e-31   NR CEP03396.1 37360 g14548 i0 68.9 1.53354632587859 74 23 70.9 0 223 2 42 115 CEP03396.1 hypothetical protein PBRA_003156 [Plasmodiophora brassicae] diamond 480 123 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31795722 31795722 PRJNA971593_P_NODE_12897_length_336_cov_1.102662_g12748_i0 PRJNA971593 12897 336 1.102662 3.70494432 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 135 1.2799999999999998e-35   NR SPQ93189.1 37360 g12748 i0 60.2 2.89285714285714 108 42 95.5 1 335 15 62 169 SPQ93189.1 unnamed protein product [Plasmodiophora brassicae] diamond 972 135 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;