RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA971593" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 4 ✖

bioproject 1

  • PRJNA971593 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28579851 28579851 PRJNA971593_P_NODE_5887_length_501_cov_2.158879_g5739_i0 PRJNA971593 5887 501 2.158879 10.81598379 root 1 Root_unresolved Root_unresolved 52 3.1e-4   NR WP_405290329.1 66852 g5739 i0 41 0.946107784431138 61 36 36.5 0 497 315 1237 1297 WP_405290329.1 hypothetical protein [Methanobrevibacter sp.] diamond 474 52.4 0.99236641221374 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30152092 30152092 PRJNA971593_P_NODE_22692_length_250_cov_1.242938_g22543_i0 PRJNA971593 22692 250 1.242938 3.107345 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 46.2 0.00257   NR WP_296789228.1 253161 g22543 i0 39.2 0.888 74 34 75.6 2 202 14 2571 2644 WP_296789228.1 Ig-like domain repeat protein [uncultured Methanobrevibacter sp.] diamond 222 46.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
31200836 31200836 PRJNA971593_P_NODE_375_length_1604_cov_4.889615_g313_i0 PRJNA971593 375 1604 4.889615 78.4294246 root 1 Root_unresolved Root_unresolved 80.1 7.5e-12   NR MBO7518105.1 66852 g313 i0 69.4 0.484413965087282 49 14 9 1 966 823 423 471 MBO7518105.1 hypothetical protein [Methanobrevibacter sp.] diamond 777 80.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
31764311 31764311 PRJNA971593_P_NODE_57_length_3332_cov_4.647745_g24_i0 PRJNA971593 57 3332 4.647745 154.8628634 Methanobrevibacter sp. 66852 Archaea Archaea 152 4.81e-33   NR WP_292800363.1 66852 g24 i0 27.8 1.18577430972389 439 269 36.1 12 1733 2935 892 1320 WP_292800363.1 hypothetical protein [Methanobrevibacter sp.] diamond 3951 152 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;