RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA971593", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA971593 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28099744 28099744 PRJNA971593_P_NODE_10225_length_379_cov_1.258170_g10076_i0 PRJNA971593 10225 379 1.25817 4.7684643 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 45.8 0.0137   NR MBN2571758.1 2049428 g10076 i0 30.1 0.973614775725594 123 70 84.7 3 3 323 551 673 MBN2571758.1 carboxypeptidase regulatory-like domain-containing protein [Ignavibacteriales bacterium] diamond 369 45.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
28194359 28194359 PRJNA971593_P_NODE_20986_length_257_cov_1.673913_g20837_i0 PRJNA971593 20986 257 1.673913 4.30195641 Ignavibacteria bacterium 2053306 Bacteria Bacteria 53.1 9.64e-6   NR MCX7877687.1 2053306 g20837 i0 38.8 4.65758754863813 85 52 99.2 0 255 1 582 666 MCX7877687.1 HAD-IC family P-type ATPase [Ignavibacteria bacterium] diamond 1197 53.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30499947 30499947 PRJNA971593_P_NODE_93_length_2636_cov_3.044869_g53_i0 PRJNA971593 93 2636 3.044869 80.26274684 Ignavibacterium sp. 2651167 Bacteria Bacteria 49.7 0.0285   NR UCH65496.1 2651167 g53 i0 26.8 0.191198786039454 168 97 17 6 1054 608 57 217 UCH65496.1 MAG: 2-phosphosulfolactate phosphatase [Ignavibacterium sp.] diamond 504 49.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;