RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA971593", tax_clade = "FCB group" and tax_phylum = "Chlorobiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlorobiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA971593 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12423620 12423620 PRJNA971593_P_NODE_7030_length_458_cov_1.470130_g6881_i0 PRJNA971593 7030 458 1.47013 6.7331954 Bacteria 2 Bacteria Bacteria 281 3.109999999999999e-87   NR NTU91171.1 2067991 g6881 i0 82.9 17.8951965065502 152 26 99.6 0 2 457 405 556 NTU91171.1 phosphoketolase family protein [Chlorobiaceae bacterium] diamond 8196 281 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales Chlorobiaceae   Chlorobiaceae bacterium
22621236 22621236 PRJNA971593_P_NODE_12098_length_347_cov_1.766423_g11949_i0 PRJNA971593 12098 347 1.766423 6.12948781 Chlorobiales bacterium 2723030 Bacteria Bacteria 182 3.38e-53   NR MCG8375199.1 2723030 g11949 i0 73 4.97118155619597 115 31 99.4 0 2 346 218 332 MCG8375199.1 phosphoketolase family protein [Chlorobiales bacterium] diamond 1725 182 1 Bacteria FCB group Pseudomonadati Chlorobiota Chlorobiia Chlorobiales     Chlorobiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;