RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA971593", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA971593 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6047446 6047446 PRJNA971593_P_NODE_23425_length_249_cov_1.312500_g23276_i0 PRJNA971593 23425 249 1.3125 3.268125 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 150 7.77e-32   NTclustered gi|2891482399|emb|OZ220089.1| 2053570 g23276 i0 82.022 21.2530120481928 178 31 71 1 72 249 4093624 4093448 MAG: Candidatus Latescibacterota bacterium isolate 4e2a754f-172e-45f6-b93c-83e01e84db49 genome assembly, chromosome: 1 blastn 5292 150 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32712744 32712744 PRJNA971593_P_NODE_16560_length_293_cov_1.050000_g16411_i0 PRJNA971593 16560 293 1.05 3.0765 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 61.6 1.56e-8   NR RPJ49456.1 2053570 g16411 i0 50 0.552901023890785 54 27 55.3 0 11 172 385 438 RPJ49456.1 MAG: T9SS C-terminal target domain-containing protein, partial [Candidatus Latescibacterota bacterium] diamond 162 61.6 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;