RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA971593", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA971593 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27500053 27500053 PRJNA971593_P_NODE_5663_length_511_cov_0.844749_g5515_i0 PRJNA971593 5663 511 0.844749 4.31666739 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 65.5 7.54e-9   NR HVK38552.1 2447898 g5515 i0 33.3 0.792563600782779 135 78 77.5 5 1 396 147 272 HVK38552.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 405 65.5 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
28857492 28857492 PRJNA971593_P_NODE_25908_length_246_cov_0.890173_g25759_i0 PRJNA971593 25908 246 0.890173 2.18982558 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 77.4 2.38e-14   NR HVK40026.1 2447898 g25759 i0 56.6 0.926829268292683 76 32 92.7 1 3 230 795 869 HVK40026.1 flagellar basal body rod modification protein [Candidatus Kapaibacterium sp.] diamond 228 77.4 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;