RNAquarium Metadata Server
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contig_metadata

31 rows where bioproject = "PRJNA971593", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 31 ✖

tax_clade 1

  • Amoebozoa · 31 ✖

bioproject 1

  • PRJNA971593 · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
944408 944408 PRJNA971593_P_NODE_5741_length_507_cov_2.260369_g5593_i0 PRJNA971593 5741 507 2.260369 11.46007083 Ripella sp. 805 1217113 Discosea other_Eukaryota 797 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g5593 i0 95.266 101.258382642998 507 16 100 7 1 507 1044 546 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 51338 797 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
2219753 2219753 PRJNA971593_P_NODE_6122_length_491_cov_1.988038_g5974_i0 PRJNA971593 6122 491 1.988038 9.76126658 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 263 2.0300000000000002e-65   NTclustered gi|470486807|ref|XM_004344593.1| 1257118 g5974 i0 81.105 22.8533604887984 344 51 69 10 154 490 592 256 Acanthamoeba castellanii str. Neff MC family transporter: phosphate, putative (ACA1_278610), partial mRNA blastn 11221 263 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4772614 4772614 PRJNA971593_P_NODE_24084_length_248_cov_1.320000_g23935_i0 PRJNA971593 24084 248 1.32 3.2736 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 143 3.6299999999999996e-38   NR XP_004353633.1 1257118 g23935 i0 80.5 0.991935483870968 82 16 99.2 0 1 246 81 162 XP_004353633.1 thioredoxin reductase 1, cytoplasmic, putative [Acanthamoeba castellanii str. Neff] diamond 246 143 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6047286 6047286 PRJNA971593_P_NODE_11085_length_363_cov_1.272414_g10936_i0 PRJNA971593 11085 363 1.272414 4.61886282 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 195 5.41e-45   NTclustered gi|470382655|ref|XM_004333851.1| 1257118 g10936 i0 78.662 8.79614325068871 314 52 85 14 2 309 736 432 Acanthamoeba castellanii str. Neff serine-tRNA ligase domain containing protein (ACA1_274400), partial mRNA blastn 3193 195 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7322363 7322363 PRJNA971593_P_NODE_26066_length_245_cov_1.790698_g25917_i0 PRJNA971593 26066 245 1.790698 4.3872101 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 180 9.72e-41   NTclustered gi|470381496|ref|XM_004333736.1| 1257118 g25917 i0 80.591 79.5102040816327 237 43 96 3 1 235 734 499 Acanthamoeba castellanii str. Neff methylmalonatesemialdehyde dehydrogenase (acylating), putative (ACA1_362550), partial mRNA blastn 19480 180 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8919016 8919016 PRJNA971593_P_NODE_11547_length_356_cov_0.929329_g11398_i0 PRJNA971593 11547 356 0.929329 3.30841124 Vannellidae 95227 Discosea other_Eukaryota 364 3.809999999999998e-96   NTclustered gi|399764216|gb|JQ271727.1| 1215631 g11398 i0 88.779 85.5365168539326 303 27 85 6 56 356 270 567 Vannella sp. BEN3V 18S ribosomal RNA gene, partial sequence blastn 30451 364 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. BEN3V
9872595 9872595 PRJNA971593_P_NODE_5128_length_535_cov_4.318182_g4981_i0 PRJNA971593 5128 535 4.318182 23.1022737 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 151 1.2299999999999996e-43   NR 7SOG_A 5755 g4981 i0 52.7 2.26542056074766 131 61 73.5 1 516 124 3 132 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 1212 151 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9872652 9872652 PRJNA971593_P_NODE_9268_length_399_cov_0.788344_g9119_i0 PRJNA971593 9268 399 0.788344 3.14549256 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 52.8 0.038   NTclustered gi|470393215|ref|XM_004334806.1| 1257118 g9119 i0 100 0.0701754385964912 28 0 7 0 233 260 369 342 Acanthamoeba castellanii str. Neff splicing factor, CC1like subfamily protein (ACA1_093880), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10194959 10194959 PRJNA971593_P_NODE_26988_length_244_cov_0.900585_g26839_i0 PRJNA971593 26988 244 0.900585 2.1974274 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 79.7 1.21e-15   NR XP_004352664.1 1257118 g26839 i0 63.9 0.75 61 22 75 0 7 189 87 147 XP_004352664.1 carrier superfamily protein [Acanthamoeba castellanii str. Neff] diamond 183 79.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10194989 10194989 PRJNA971593_P_NODE_5288_length_528_cov_2.887912_g5141_i0 PRJNA971593 5288 528 2.887912 15.24817536 Vannellidae 95227 Discosea other_Eukaryota 802 0   NTclustered gi|62865947|gb|AY929922.1| 325065 g5141 i0 94.162 101.255681818182 531 23 100 7 1 528 562 37 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 53463 804 0.997512437810945 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
11147767 11147767 PRJNA971593_P_NODE_14429_length_316_cov_2.534979_g14280_i0 PRJNA971593 14429 316 2.534979 8.01053364 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 302 2.66e-77   NTclustered gi|470371714|ref|XM_004332823.1| 1257118 g14280 i0 89.496 35.2658227848101 238 25 75 0 79 316 1262 1025 Acanthamoeba castellanii str. Neff nucleolar protein Nop56, putative (ACA1_180800), partial mRNA blastn 11144 302 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11147773 11147773 PRJNA971593_P_NODE_1529_length_933_cov_6.912791_g1420_i0 PRJNA971593 1529 933 6.912791 64.49634003 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 363 2.7500000000000003e-123   NR XP_004341437.1 1257118 g1420 i0 69.5 7.22508038585209 246 74 79.1 1 11 748 1 245 XP_004341437.1 ribosomal proteins l2, RNA binding domain containing protein [Acanthamoeba castellanii str. Neff] diamond 6741 363 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12423659 12423659 PRJNA971593_P_NODE_9450_length_395_cov_1.195652_g9301_i0 PRJNA971593 9450 395 1.195652 4.7228254 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 186 1.04e-53   NR XP_004334901.1 1257118 g9301 i0 68.5 0.987341772151899 130 41 98.7 0 394 5 243 372 XP_004334901.1 plastin 3 (T isoform), putative [Acanthamoeba castellanii str. Neff] diamond 390 186 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14972376 14972376 PRJNA971593_P_NODE_8352_length_420_cov_2.386167_g8203_i0 PRJNA971593 8352 420 2.386167 10.0219014 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 178 3.68e-49   NR XP_004340275.1 1257118 g8203 i0 59.7 2.84285714285714 134 53 95.7 1 3 404 579 711 XP_004340275.1 ATPdependent RNA helicase Ddx1, putative [Acanthamoeba castellanii str. Neff] diamond 1194 178 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17522523 17522523 PRJNA971593_P_NODE_994_length_1123_cov_14.630476_g902_i0 PRJNA971593 994 1123 14.630476 164.30024548 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 702 0   NTclustered gi|470437282|ref|XM_004338924.1| 1257118 g902 i0 81.105 78.6447016918967 905 147 79 20 76 965 43 938 Acanthamoeba castellanii str. Neff adenine nucleotide translocator, putative (ACA1_128450), partial mRNA blastn 88318 702 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23896708 23896708 PRJNA971593_P_NODE_1999_length_832_cov_1.223979_g1874_i0 PRJNA971593 1999 832 1.223979 10.18350528 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 300 7.900000000000001e-98   NR XP_004341795.1 1257118 g1874 i0 65.6 4.89302884615385 276 88 99.5 2 829 2 2 270 XP_004341795.1 guanine nucleotide-binding protein beta subunit, putative [Acanthamoeba castellanii str. Neff] diamond 4071 300 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25170243 25170243 PRJNA971593_P_NODE_100_length_2565_cov_3.880417_g60_i0 PRJNA971593 100 2565 3.880417 99.53269605 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 1646 0   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g60 i0 78.614 93.1052631578947 2539 505 98 32 28 2547 1 2520 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 238815 1646 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25170512 25170512 PRJNA971593_P_NODE_29460_length_240_cov_2.137725_g29311_i0 PRJNA971593 29460 240 2.137725 5.13054 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 207 4.35e-49   NTclustered gi|470416357|ref|XM_004336829.1| 1257118 g29311 i0 84.434 86.2875 212 31 88 2 4 214 1073 863 Acanthamoeba castellanii str. Neff fumarate hydratase, class II, putative (ACA1_130590), partial mRNA blastn 20709 207 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26899441 26899441 PRJNA971593_P_NODE_18021_length_281_cov_1.110577_g17872_i0 PRJNA971593 18021 281 1.110577 3.12072137 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 59.7 4.3e-8   NR XP_004342810.1 1257118 g17872 i0 54.3 0.491103202846975 46 21 49.1 0 280 143 160 205 XP_004342810.1 major capsid protein [Acanthamoeba castellanii str. Neff] diamond 138 59.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27437047 27437047 PRJNA971593_P_NODE_27343_length_244_cov_0.900585_g27194_i0 PRJNA971593 27343 244 0.900585 2.1974274 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 63.2 2.47e-9   NR XP_004358071.1 1257118 g27194 i0 37 0.995901639344262 81 51 99.6 0 244 2 334 414 XP_004358071.1 Interferoninducible protein Gig2, putative [Acanthamoeba castellanii str. Neff] diamond 243 63.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27537887 27537887 PRJNA971593_P_NODE_2203_length_798_cov_1.800000_g2071_i0 PRJNA971593 2203 798 1.8 14.364 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 246 5.57e-79   NR XP_004352977.1 1257118 g2071 i0 59.2 5.1015037593985 191 76 71.8 1 692 120 2 190 XP_004352977.1 Sar1family small GTPase [Acanthamoeba castellanii str. Neff] diamond 4071 248 0.991935483870968 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27721408 27721408 PRJNA971593_P_NODE_14644_length_314_cov_1.278008_g14495_i0 PRJNA971593 14644 314 1.278008 4.01294512 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.5 6.29e-4   NR XP_004348682.1 1257118 g14495 i0 59.4 0.305732484076433 32 13 30.6 0 159 64 26 57 XP_004348682.1 SH3 domain containing protein [Acanthamoeba castellanii str. Neff] diamond 96 48.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28320822 28320822 PRJNA971593_P_NODE_26606_length_245_cov_0.895349_g26457_i0 PRJNA971593 26606 245 0.895349 2.19360505 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 83.2 5.57e-17   NR XP_004341414.1 1257118 g26457 i0 69.6 0.685714285714286 56 17 68.6 0 78 245 1 56 XP_004341414.1 Factin-capping protein subunit alpha-2, putative [Acanthamoeba castellanii str. Neff] diamond 168 83.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28510352 28510352 PRJNA971593_P_NODE_5407_length_523_cov_3.211111_g5260_i0 PRJNA971593 5407 523 3.211111 16.79411053 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.8 7.44e-5   NR XP_004351526.1 1257118 g5260 i0 42 0.395793499043977 69 36 39.6 1 489 283 26 90 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 207 50.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29236608 29236608 PRJNA971593_P_NODE_18509_length_277_cov_1.509804_g18360_i0 PRJNA971593 18509 277 1.509804 4.18215708 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 152 3.43e-41   NR XP_004339270.1 1257118 g18360 i0 75 0.996389891696751 92 23 99.6 0 277 2 301 392 XP_004339270.1 Tcomplex protein 1, eta subunit [Acanthamoeba castellanii str. Neff] diamond 276 152 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30026113 30026113 PRJNA971593_P_NODE_19911_length_266_cov_1.196891_g19762_i0 PRJNA971593 19911 266 1.196891 3.18373006 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 91.7 1.5700000000000001e-19   NR XP_004354014.1 1257118 g19762 i0 54.1 3.90225563909774 85 37 95.9 2 7 261 181 263 XP_004354014.1 ADP/ATP carrier protein [Acanthamoeba castellanii str. Neff] diamond 1038 91.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30689330 30689330 PRJNA971593_P_NODE_21953_length_251_cov_0.865169_g21804_i0 PRJNA971593 21953 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 98.6 4.2e-23   NR XP_004335873.1 1257118 g21804 i0 56.4 3.70517928286853 78 34 93.2 0 3 236 56 133 XP_004335873.1 RNA recognition domain containing protein [Acanthamoeba castellanii str. Neff] diamond 930 98.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31922447 31922447 PRJNA971593_P_NODE_12437_length_342_cov_1.546468_g12288_i0 PRJNA971593 12437 342 1.546468 5.28892056 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 149 1.6499999999999998e-42   NR XP_004336791.1 1257118 g12288 i0 61.9 10.9035087719298 113 43 99.1 0 341 3 91 203 XP_004336791.1 adenylate kinase [Acanthamoeba castellanii str. Neff] diamond 3729 149 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32334089 32334089 PRJNA971593_P_NODE_23599_length_249_cov_0.875000_g23450_i0 PRJNA971593 23599 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.9 0.0168   NR XP_004333542.1 1257118 g23450 i0 33.8 2.40963855421687 65 43 78.3 0 52 246 2147 2211 XP_004333542.1 Inositol 1,4,5trisphosphate receptor type 2, putative [Acanthamoeba castellanii str. Neff] diamond 600 43.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32523935 32523935 PRJNA971593_P_NODE_12099_length_347_cov_1.686131_g11950_i0 PRJNA971593 12099 347 1.686131 5.85087457 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 92.8 3.47e-19   NR XP_004338433.1 1257118 g11950 i0 55.8 3.36311239193084 77 34 66.6 0 112 342 1 77 XP_004338433.1 HSP91 (Heat shock protein 91), putative [Acanthamoeba castellanii str. Neff] diamond 1167 92.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32844976 32844976 PRJNA971593_P_NODE_10580_length_372_cov_1.204013_g10431_i0 PRJNA971593 10580 372 1.204013 4.47892836 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.1 4.47e-4   NR XP_004344152.1 1257118 g10431 i0 28.6 1.92741935483871 119 71 91.1 3 339 1 315 425 XP_004344152.1 uncharacterized protein ACA1_054950 [Acanthamoeba castellanii str. Neff] diamond 717 50.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;