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contig_metadata

29 rows where bioproject = "PRJNA966993" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJNA966993 · 29 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3493134 3493134 PRJNA966993_P_NODE_74323_length_263_cov_2.384211_g73871_i0 PRJNA966993 74323 263 2.384211 6.27047493 Geobacter 28231 Bacteria Bacteria 148 1.13e-39   NR WP_286351014.1 28231 g73871 i0 73.6 0.992395437262357 87 22 99.2 1 261 1 115 200 WP_286351014.1 MULTISPECIES: phosphoenolpyruvate carboxykinase (GTP) [Geobacter] diamond 261 148 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geobacter  
6045874 6045874 PRJNA966993_P_NODE_94985_length_243_cov_1.835294_g94533_i0 PRJNA966993 94985 243 1.835294 4.45976442 Desulfobulbus elongatus 53332 Bacteria Bacteria 94 1.27e-20   NR WP_028317948.1 53332 g94533 i0 79.7 2.39506172839506 64 12 79 1 192 1 4 66 WP_028317948.1 alkene reductase [Desulfobulbus elongatus] diamond 582 94 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfobulbus Desulfobulbus elongatus
21344569 21344569 PRJNA966993_P_NODE_79777_length_254_cov_2.734807_g79325_i0 PRJNA966993 79777 254 2.734807 6.94640978 root 1 Root_unresolved Root_unresolved 119 5.4399999999999995e-30   NR WP_185243242.1 60035 g79325 i0 74.3 10.748031496063 70 18 82.7 0 1 210 71 140 WP_185243242.1 chorismate synthase [Citrifermentans bremense] diamond 2730 119 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Citrifermentans Citrifermentans bremense
25168443 25168443 PRJNA966993_P_NODE_57200_length_289_cov_1.069444_g56748_i0 PRJNA966993 57200 289 1.069444 3.09069316 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 130 1.49e-36   NR GJM17742.1 2202153 g56748 i0 72.8 0.955017301038062 92 24 95.5 1 289 14 8 98 GJM17742.1 MAG: hypothetical protein DHS20C13_30690 [Thermodesulfobacteriota bacterium] diamond 276 130 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
26746928 26746928 PRJNA966993_P_NODE_83361_length_251_cov_0.865169_g82909_i0 PRJNA966993 83361 251 0.865169 2.17157419 Pseudomonadati 3379134 Bacteria Bacteria 103 1.16e-23   NR WP_027370348.1 339722 g82909 i0 58.5 4.9003984063745 82 32 98 1 5 250 545 624 WP_027370348.1 acetoacetate--CoA ligase [Desulfovermiculus halophilus] diamond 1230 103 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae Desulfovermiculus Desulfovermiculus halophilus
27057520 27057520 PRJNA966993_P_NODE_63542_length_279_cov_2.966019_g63090_i0 PRJNA966993 63542 279 2.966019 8.27519301 Desulfobacca acetoxidans 60893 Bacteria Bacteria 100 3.84e-22   NR WP_013705225.1 60893 g63090 i0 54.8 1 93 41 98.9 1 3 278 513 605 WP_013705225.1 CHASE2 domain-containing protein [Desulfobacca acetoxidans] diamond 279 100 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobaccia Desulfobaccales Desulfobaccaceae Desulfobacca Desulfobacca acetoxidans
27158322 27158322 PRJNA966993_P_NODE_47602_length_313_cov_1.858333_g47150_i0 PRJNA966993 47602 313 1.858333 5.81658229 Pseudomonadati 3379134 Bacteria Bacteria 52.4 2.46e-5   NR MCU0581164.1 2928017 g47150 i0 44.6 2.38658146964856 56 27 49.8 2 179 24 136 191 MCU0581164.1 rhodanese-like domain-containing protein [Syntrophales bacterium] diamond 747 52.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales     Syntrophales bacterium
27247136 27247136 PRJNA966993_P_NODE_48163_length_311_cov_2.655462_g47711_i0 PRJNA966993 48163 311 2.655462 8.25848682 Desulfobacterales bacterium 2044940 Bacteria Bacteria 45.8 0.00694   NR MCP4351509.1 2044940 g47711 i0 45.7 0.443729903536977 46 25 44.4 0 140 3 509 554 MCP4351509.1 hypothetical protein [Desulfobacterales bacterium] diamond 138 45.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
27436983 27436983 PRJNA966993_P_NODE_66163_length_276_cov_1.137931_g65711_i0 PRJNA966993 66163 276 1.137931 3.14068956 Desulfovibrionaceae bacterium 2049043 Bacteria Bacteria 90.1 4.71e-20   NR MBG0776896.1 2049043 g65711 i0 52.5 1.73913043478261 80 38 87 0 276 37 120 199 MBG0776896.1 NAD(P)H:quinone oxidoreductase [Desulfovibrionaceae bacterium] diamond 480 90.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae   Desulfovibrionaceae bacterium
27531396 27531396 PRJNA966993_P_NODE_16563_length_514_cov_2.020408_g16121_i0 PRJNA966993 16563 514 2.020408 10.38489712 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 141 1.43e-35   NR HAO22905.1 2049433 g16121 i0 38.2 0.992217898832685 170 104 99.2 1 514 5 96 264 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 510 141 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
27759117 27759117 PRJNA966993_P_NODE_78984_length_256_cov_1.349727_g78532_i0 PRJNA966993 78984 256 1.349727 3.45530112 Bacteria 2 Bacteria Bacteria 51.6 3.29e-5   NR WP_020588391.1 2290 g78532 i0 51.2 3.78515625 43 21 50.4 0 5 133 515 557 WP_020588391.1 tetratricopeptide repeat protein [Desulfobacter curvatus] diamond 969 52 0.992307692307692 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacter Desulfobacter curvatus
27910031 27910031 PRJNA966993_P_NODE_33205_length_370_cov_2.306397_g32753_i0 PRJNA966993 33205 370 2.306397 8.5336689 Smithella sp. 2053614 Bacteria Bacteria 56.2 2.71e-7   NR MBP9013957.1 2053614 g32753 i0 38.4 0.697297297297297 86 41 60.8 3 102 326 30 114 MBP9013957.1 hypothetical protein [Smithella sp.] diamond 258 56.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Smithellaceae Smithella Smithella sp.
28131525 28131525 PRJNA966993_P_NODE_76685_length_260_cov_1.235294_g76233_i0 PRJNA966993 76685 260 1.235294 3.2117644 Desulfuromonas sp. SDB 1735325 Bacteria Bacteria 42.7 0.044   NR KQC13055.1 1735325 g76233 i0 40 0.634615384615385 55 32 63.5 1 240 76 26 79 KQC13055.1 MAG: hypothetical protein APR63_01465 [Desulfuromonas sp. SDB] diamond 165 42.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Desulfuromonas Desulfuromonas sp. SDB
28257519 28257519 PRJNA966993_P_NODE_79126_length_256_cov_0.945355_g78674_i0 PRJNA966993 79126 256 0.945355 2.4201088 Solidesulfovibrio aerotolerans 295255 Bacteria Bacteria 42.7 0.044   NR WP_160960839.1 295255 g78674 i0 35.5 0.7265625 62 32 70.3 2 65 244 314 369 WP_160960839.1 hypothetical protein [Solidesulfovibrio aerotolerans] diamond 186 42.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Solidesulfovibrio Solidesulfovibrio aerotolerans
28295448 28295448 PRJNA966993_P_NODE_65066_length_277_cov_1.985294_g64614_i0 PRJNA966993 65066 277 1.985294 5.49926438 root 1 Root_unresolved Root_unresolved 63.2 2.26e-9   NR UCG81145.1 2044940 g64614 i0 43.9 2.49097472924188 82 44 87.7 2 255 13 146 226 UCG81145.1 MAG: DUF547 domain-containing protein [Desulfobacterales bacterium] diamond 690 63.5 0.995275590551181 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
28668232 28668232 PRJNA966993_P_NODE_25647_length_416_cov_2.227405_g25200_i0 PRJNA966993 25647 416 2.227405 9.2660048 Desulfovibrionaceae bacterium 2049043 Bacteria Bacteria 45.4 0.0154   NR MDD6181102.1 2049043 g25200 i0 34.4 0.461538461538462 64 41 45.4 1 256 68 40 103 MDD6181102.1 glycerol-3-phosphate 1-O-acyltransferase PlsY [Desulfovibrionaceae bacterium] diamond 192 45.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae   Desulfovibrionaceae bacterium
30247311 30247311 PRJNA966993_P_NODE_92492_length_245_cov_0.895349_g92040_i0 PRJNA966993 92492 245 0.895349 2.19360505 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 59.3 5.43e-8   NR MCX8117345.1 2202153 g92040 i0 62.8 5.21632653061225 43 16 52.7 0 42 170 312 354 MCX8117345.1 AMP-binding protein [Thermodesulfobacteriota bacterium] diamond 1278 59.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
30278992 30278992 PRJNA966993_P_NODE_101472_length_226_cov_3.450980_g101020_i0 PRJNA966993 101472 226 3.45098 7.7992148 Geobacteraceae bacterium 2282154 Bacteria Bacteria 103 1.83e-24   NR HTP65492.1 2282154 g101020 i0 67.6 1.80530973451327 68 22 90.3 0 1 204 209 276 HTP65492.1 ribose-phosphate pyrophosphokinase [Geobacteraceae bacterium] diamond 408 103 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae   Geobacteraceae bacterium
30853675 30853675 PRJNA966993_P_NODE_65094_length_277_cov_1.887255_g64642_i0 PRJNA966993 65094 277 1.887255 5.22769635 root 1 Root_unresolved Root_unresolved 107 6.620000000000001e-26   NR WP_011342514.1 19 g64642 i0 57.1 6.90974729241877 91 35 98.6 2 275 3 78 164 WP_011342514.1 ADP-ribose pyrophosphatase [Syntrophotalea carbinolica] diamond 1914 108 0.990740740740741 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Syntrophotaleaceae Syntrophotalea Syntrophotalea carbinolica
30980268 30980268 PRJNA966993_P_NODE_44954_length_322_cov_1.236948_g44502_i0 PRJNA966993 44954 322 1.236948 3.98297256 Bacteria 2 Bacteria Bacteria 50.8 2.69e-5   NR MFC1863426.1 2202153 g44502 i0 35.1 1.36024844720497 74 46 68.9 1 224 3 34 105 MFC1863426.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 438 50.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31068710 31068710 PRJNA966993_P_NODE_13155_length_580_cov_1.487179_g12722_i0 PRJNA966993 13155 580 1.487179 8.6256382 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 171 6.94e-47   NR HZX13321.1 2202153 g12722 i0 47.8 2.79827586206897 180 87 91.6 2 50 580 100 275 HZX13321.1 HTTM domain-containing protein [Thermodesulfobacteriota bacterium] diamond 1623 171 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31359549 31359549 PRJNA966993_P_NODE_86956_length_248_cov_2.177143_g86504_i0 PRJNA966993 86956 248 2.177143 5.39931464 Desulfuromonadia 3031651 Bacteria Bacteria 134 3.36e-34   NR PLX87959.1 892 g86504 i0 79 29.5040322580645 81 17 98 0 4 246 556 636 PLX87959.1 MAG: pyruvate, phosphate dikinase [Desulfuromonas sp.] diamond 7317 135 0.992592592592593 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Desulfuromonas Desulfuromonas sp.
31479825 31479825 PRJNA966993_P_NODE_57576_length_288_cov_1.432558_g57124_i0 PRJNA966993 57576 288 1.432558 4.12576704 Geoalkalibacter ferrihydriticus 392333 Bacteria Bacteria 66.2 1.83e-10   NR WP_040099168.1 392333 g57124 i0 37.3 1.0625 102 55 96.9 2 287 9 166 267 WP_040099168.1 DNA ligase [Geoalkalibacter ferrihydriticus] diamond 306 66.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Geoalkalibacteraceae Geoalkalibacter Geoalkalibacter ferrihydriticus
31574669 31574669 PRJNA966993_P_NODE_91016_length_246_cov_0.890173_g90564_i0 PRJNA966993 91016 246 0.890173 2.18982558 Desulfogranum japonicum 231447 Bacteria Bacteria 61.2 1.2e-8   NR WP_028581965.1 231447 g90564 i0 40.7 1.04878048780488 86 45 97.6 1 243 4 353 438 WP_028581965.1 ankyrin repeat domain-containing protein [Desulfogranum japonicum] diamond 258 61.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfogranum Desulfogranum japonicum
31637634 31637634 PRJNA966993_P_NODE_77636_length_258_cov_1.664865_g77184_i0 PRJNA966993 77636 258 1.664865 4.2953517 Desulfococcaceae bacterium HSG8 3055603 Bacteria Bacteria 57.8 2.32e-7   NR MDM8525676.1 3055603 g77184 i0 40.3 0.895348837209302 77 45 89.5 1 233 3 1591 1666 MDM8525676.1 hypothetical protein [Desulfococcaceae bacterium HSG8] diamond 231 57.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae   Desulfococcaceae bacterium HSG8
32365636 32365636 PRJNA966993_P_NODE_75699_length_261_cov_1.851064_g75247_i0 PRJNA966993 75699 261 1.851064 4.83127704 Pseudodesulfovibrio portus 231439 Bacteria Bacteria 42.7 0.048   NR WP_264981510.1 231439 g75247 i0 31.9 0.827586206896552 72 47 82.8 1 222 7 221 290 WP_264981510.1 Lon protease family protein [Pseudodesulfovibrio portus] diamond 216 42.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Pseudodesulfovibrio Pseudodesulfovibrio portus
32428727 32428727 PRJNA966993_P_NODE_19539_length_474_cov_2.688279_g19094_i0 PRJNA966993 19539 474 2.688279 12.74244246 Desulfuromonadales bacterium C 2099678 Bacteria Bacteria 69.3 7.29e-11   NR OEU50623.1 1869311 g19094 i0 43.5 1.77215189873418 92 48 55.7 1 7 270 144 235 OEU50623.1 MAG: hypothetical protein BA871_16770 [Desulfuromonadales bacterium C00003096] diamond 840 69.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales     Desulfuromonadales bacterium C00003096
32586958 32586958 PRJNA966993_P_NODE_64839_length_278_cov_1.126829_g64387_i0 PRJNA966993 64839 278 1.126829 3.13258462 Desulfobacterota bacterium AH_259_B03_O07 2935766 Bacteria Bacteria 93.2 3.83e-20   NR MDA2918526.1 2935766 g64387 i0 38.5 0.982014388489209 91 55 97.1 1 271 2 119 209 MDA2918526.1 methyltransferase domain-containing protein [Desulfobacterota bacterium AH_259_B03_O07] diamond 273 93.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Desulfobacterota bacterium AH_259_B03_O07
32901487 32901487 PRJNA966993_P_NODE_31500_length_379_cov_1.424837_g31048_i0 PRJNA966993 31500 379 1.424837 5.40013223 Oceanidesulfovibrio indonesiensis 54767 Bacteria Bacteria 77.8 7.38e-14   NR WP_144302944.1 54767 g31048 i0 43.6 3.97361477572559 117 55 92.6 3 355 5 33 138 WP_144302944.1 GAK system CofD-like protein [Oceanidesulfovibrio indonesiensis] diamond 1506 77.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Oceanidesulfovibrio Oceanidesulfovibrio indonesiensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;