RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

16 rows where bioproject = "PRJNA966993" and tax_phylum = "Tardigrada"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA966993 · 16 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2217253 2217253 PRJNA966993_P_NODE_2002_length_1381_cov_2.803517_g1806_i0 PRJNA966993 2002 1381 2.803517 38.71656977 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 439 5.579999999999998e-148   NR XP_055344506.1 2943436 g1806 i0 53.4 39.5561187545257 410 190 89.1 1 17 1246 15 423 XP_055344506.1 eukaryotic peptide chain release factor subunit 1-like [Paramacrobiotus metropolitanus] diamond 54627 439 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
17520102 17520102 PRJNA966993_P_NODE_33094_length_371_cov_1.322148_g32642_i0 PRJNA966993 33094 371 1.322148 4.90516908 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 177 6.36e-51   NR GAV05741.1 947166 g32642 i0 76.4 0.994609164420485 123 28 98.7 1 366 1 1 123 GAV05741.1 hypothetical protein RvY_15822 [Ramazzottius varieornatus] diamond 369 177 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
26962427 26962427 PRJNA966993_P_NODE_39502_length_342_cov_1.717472_g39050_i0 PRJNA966993 39502 342 1.717472 5.87375424 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 90.1 2.1e-18   NR GAU98412.1 947166 g39050 i0 55.2 2.2719298245614 87 37 74.6 1 68 322 2 88 GAU98412.1 hypothetical protein RvY_09564 [Ramazzottius varieornatus] diamond 777 90.1 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
27089204 27089204 PRJNA966993_P_NODE_55522_length_291_cov_2.018349_g55070_i0 PRJNA966993 55522 291 2.018349 5.87339559 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 142 8.63e-38   NR XP_055332054.1 2943436 g55070 i0 71.9 0.917525773195876 89 25 91.8 0 267 1 7 95 XP_055332054.1 pancreatic alpha-amylase-like [Paramacrobiotus metropolitanus] diamond 267 142 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
27342172 27342172 PRJNA966993_P_NODE_86843_length_248_cov_3.188571_g86391_i0 PRJNA966993 86843 248 3.188571 7.90765608 Hypsibius exemplaris 2072580 Tardigrada other_Eukaryota 43.1 0.0286   NR OQV13661.1 2072580 g86391 i0 46.5 0.520161290322581 43 23 52 0 236 108 52 94 OQV13661.1 putative Monocarboxylate transporter 13 [Hypsibius exemplaris] diamond 129 43.1 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius exemplaris
27500001 27500001 PRJNA966993_P_NODE_81683_length_251_cov_2.269663_g81231_i0 PRJNA966993 81683 251 2.269663 5.69685413 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 46.2 0.00253   NR GAV07996.1 947166 g81231 i0 43.2 1.57768924302789 44 23 52.6 1 6 137 998 1039 GAV07996.1 hypothetical protein RvY_17762 [Ramazzottius varieornatus] diamond 396 46.2 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
28706146 28706146 PRJNA966993_P_NODE_48527_length_310_cov_3.426160_g48075_i0 PRJNA966993 48527 310 3.42616 10.621096 Opisthokonta 33154 Tardigrada other_Eukaryota 63.5 1.5e-9   NR GAU95530.1 947166 g48075 i0 66 2.45806451612903 50 17 48.4 0 297 148 137 186 GAU95530.1 hypothetical protein RvY_07131 [Ramazzottius varieornatus] diamond 762 63.9 0.993740219092332 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
29488897 29488897 PRJNA966993_P_NODE_87450_length_248_cov_0.880000_g86998_i0 PRJNA966993 87450 248 0.88 2.1824 Hypsibius dujardini 232323 Tardigrada other_Eukaryota 85.9 1.57e-17   NR ALT32096.1 232323 g86998 i0 48.1 6.45967741935484 77 40 93.1 0 8 238 233 309 ALT32096.1 putative pre-mRNA-splicing factor RBM22 [Hypsibius dujardini] diamond 1602 85.9 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius dujardini
30279014 30279014 PRJNA966993_P_NODE_46792_length_316_cov_1.267490_g46340_i0 PRJNA966993 46792 316 1.26749 4.0052684 Hypsibius exemplaris 2072580 Tardigrada other_Eukaryota 60.8 2.92e-8   NR OQV22079.1 2072580 g46340 i0 35.9 0.873417721518987 92 50 84.5 4 274 8 48 133 OQV22079.1 hypothetical protein BV898_03924 [Hypsibius exemplaris] diamond 276 60.8 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius exemplaris
30348714 30348714 PRJNA966993_P_NODE_28552_length_396_cov_2.198142_g28102_i0 PRJNA966993 28552 396 2.198142 8.70464232 Parachela 149990 Tardigrada other_Eukaryota 114 7.71e-30   NR GAU90086.1 947166 g28102 i0 43.5 1.63636363636364 108 60 81.1 1 369 49 3 110 GAU90086.1 hypothetical protein RvY_02556-1 [Ramazzottius varieornatus] diamond 648 114 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
30657761 30657761 PRJNA966993_P_NODE_28693_length_395_cov_2.720497_g28241_i0 PRJNA966993 28693 395 2.720497 10.74596315 Hypsibius exemplaris 2072580 Tardigrada other_Eukaryota 76.6 3.03e-14   NR OWA50473.1 2072580 g28241 i0 65.5 0.89620253164557 58 19 44.1 1 216 389 4 60 OWA50473.1 putative Glutathione S-transferase 1 [Hypsibius exemplaris] diamond 354 76.6 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius exemplaris
30917077 30917077 PRJNA966993_P_NODE_63254_length_280_cov_1.483092_g62802_i0 PRJNA966993 63254 280 1.483092 4.1526576 Metazoa 33208 Tardigrada other_Eukaryota 122 2.63e-30   NR GAU91452.1 947166 g62802 i0 71.1 4.44642857142857 76 22 81.4 0 47 274 53 128 GAU91452.1 hypothetical protein RvY_03701 [Ramazzottius varieornatus] diamond 1245 123 0.991869918699187 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
31890753 31890753 PRJNA966993_P_NODE_55417_length_291_cov_2.655963_g54965_i0 PRJNA966993 55417 291 2.655963 7.72885233 Hypsibius exemplaris 2072580 Tardigrada other_Eukaryota 43.1 0.0487   NR OWA55033.1 2072580 g54965 i0 40.8 0.731958762886598 71 29 59.8 3 3 176 556 626 OWA55033.1 putative Vascular endothelial growth factor receptor 3 [Hypsibius exemplaris] diamond 213 43.1 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius exemplaris
32017297 32017297 PRJNA966993_P_NODE_34398_length_364_cov_3.443299_g33946_i0 PRJNA966993 34398 364 3.443299 12.53360836 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 53.1 2.88e-5   NR GAV07460.1 947166 g33946 i0 35.4 1.07142857142857 130 48 78.3 5 2 286 202 330 GAV07460.1 hypothetical protein RvY_17290 [Ramazzottius varieornatus] diamond 390 53.1 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
32365638 32365638 PRJNA966993_P_NODE_80579_length_253_cov_1.711111_g80127_i0 PRJNA966993 80579 253 1.711111 4.32911083 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 44.7 0.0087   NR GAU98834.1 947166 g80127 i0 39.7 0.687747035573123 58 33 66.4 1 170 3 679 736 GAU98834.1 hypothetical protein RvY_09924 [Ramazzottius varieornatus] diamond 174 44.7 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
32561851 32561851 PRJNA966993_P_NODE_33139_length_371_cov_1.033557_g32687_i0 PRJNA966993 33139 371 1.033557 3.83449647 Parachela 149990 Tardigrada other_Eukaryota 182 2.6299999999999996e-54   NR OWA51711.1 2072580 g32687 i0 68.4 12.7035040431267 117 37 94.6 0 10 360 98 214 OWA51711.1 40S ribosomal protein SA [Hypsibius exemplaris] diamond 4713 182 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius exemplaris

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;