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contig_metadata

5 rows where bioproject = "PRJNA966993", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 5 ✖

tax_phylum 1

  • Promethearchaeota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA966993 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26836186 26836186 PRJNA966993_P_NODE_80081_length_254_cov_1.657459_g79629_i0 PRJNA966993 80081 254 1.657459 4.20994586 Promethearchaeota archaeon 2053489 Archaea Archaea 44.3 0.0117   NR MEJ2296307.1 2053489 g79629 i0 48.8 0.507874015748031 43 22 50.8 0 3 131 247 289 MEJ2296307.1 tetratricopeptide repeat protein [Promethearchaeota archaeon] diamond 129 44.3 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
27847061 27847061 PRJNA966993_P_NODE_62584_length_281_cov_1.423077_g62132_i0 PRJNA966993 62584 281 1.423077 3.99884637 Promethearchaeota archaeon 2053489 Archaea Archaea 47.4 4e-4   NR TXT63965.1 2053489 g62132 i0 43.3 1.52669039145907 60 27 64.1 1 2 181 80 132 TXT63965.1 MAG: Thioredoxin [Promethearchaeota archaeon] diamond 429 47.4 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
30499887 30499887 PRJNA966993_P_NODE_79033_length_256_cov_1.262295_g78581_i0 PRJNA966993 79033 256 1.262295 3.2314752 Promethearchaeota archaeon 2053489 Archaea Archaea 60.1 2.86e-8   NR MBY8980548.1 2053489 g78581 i0 40 0.9375 80 39 93.8 1 254 15 254 324 MBY8980548.1 GTP-binding protein [Promethearchaeota archaeon] diamond 240 60.1 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
30942297 30942297 PRJNA966993_P_NODE_100214_length_237_cov_2.097561_g99762_i0 PRJNA966993 100214 237 2.097561 4.97121957 Promethearchaeota archaeon 2053489 Archaea Archaea 42.4 0.0464   NR MBD3339160.1 2053489 g99762 i0 46.3 0.518987341772152 41 22 51.9 0 3 125 33 73 MBD3339160.1 tetratricopeptide repeat protein [Promethearchaeota archaeon] diamond 123 42.4 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
32048951 32048951 PRJNA966993_P_NODE_39198_length_343_cov_3.314815_g38746_i0 PRJNA966993 39198 343 3.314815 11.36981545 Candidatus Harpocratesius repetitus 3049170 Archaea Archaea 43.5 0.00904   NR MCF2140270.1 3049170 g38746 i0 44.4 0.892128279883382 45 25 39.4 0 226 92 4 48 MCF2140270.1 cold-shock protein [Candidatus Harpocratesius repetitus] diamond 306 43.5 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia Promethearchaeales Promethearchaeaceae Candidatus Harpocratesius Candidatus Harpocratesius repetitus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;