RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA966993" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA966993 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12421667 12421667 PRJNA966993_P_NODE_88210_length_248_cov_0.880000_g87758_i0 PRJNA966993 88210 248 0.88 2.1824 Lentisphaerae bacterium GWF2_5 1932692 Bacteria Bacteria 103 6.21e-24   NR OGV57721.1 1798574 g87758 i0 61 0.991935483870968 82 31 98 1 244 2 29 110 OGV57721.1 MAG: metal-independent alpha-mannosidase [Lentisphaerae bacterium GWF2_50_93] diamond 246 103 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium GWF2_50_93
30152045 30152045 PRJNA966993_P_NODE_74712_length_263_cov_1.363158_g74260_i0 PRJNA966993 74712 263 1.363158 3.58510554 Lentisphaeria bacterium 2053569 Bacteria Bacteria 43.1 0.0325   NR HCN08912.1 2053569 g74260 i0 37.3 1.4828897338403 59 34 63.9 1 183 16 10 68 HCN08912.1 hypothetical protein [Lentisphaeria bacterium] diamond 390 43.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32112310 32112310 PRJNA966993_P_NODE_52278_length_299_cov_3.141593_g51826_i0 PRJNA966993 52278 299 3.141593 9.39336307 Victivallales bacterium 2212475 Bacteria Bacteria 45.4 0.00808   NR MBO7742406.1 2212475 g51826 i0 34.5 0.842809364548495 84 49 80.3 2 50 289 212 293 MBO7742406.1 O-antigen ligase family protein [Victivallales bacterium] diamond 252 45.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
32586951 32586951 PRJNA966993_P_NODE_57859_length_288_cov_1.181395_g57407_i0 PRJNA966993 57859 288 1.181395 3.4024176 Lentisphaeria bacterium 2053569 Bacteria Bacteria 123 2.74e-31   NR MBQ9772527.1 2053569 g57407 i0 62.1 6.92708333333333 95 36 99 0 287 3 170 264 MBQ9772527.1 GTPase ObgE [Lentisphaeria bacterium] diamond 1995 123 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;