RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA966993" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA966993 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28952560 28952560 PRJNA966993_P_NODE_95368_length_243_cov_1.105882_g94916_i0 PRJNA966993 95368 243 1.105882 2.68729326 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 43.5 0.0193   NR HPW58865.1 3022866 g94916 i0 32.9 0.938271604938272 76 50 93.8 1 6 233 391 465 HPW58865.1 SPFH domain-containing protein [Candidatus Rifleibacterium sp.] diamond 228 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.
29520567 29520567 PRJNA966993_P_NODE_62450_length_281_cov_1.480769_g61998_i0 PRJNA966993 62450 281 1.480769 4.16096089 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 42.4 0.0419   NR MBI4860197.1 2053586 g61998 i0 37.8 0.96085409252669 90 52 91.8 2 271 14 47 136 MBI4860197.1 hypothetical protein [Candidatus Rifleibacteriota bacterium] diamond 270 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
31637591 31637591 PRJNA966993_P_NODE_32636_length_373_cov_1.780000_g32184_i0 PRJNA966993 32636 373 1.78 6.6394 Candidatus Rifleibacterium sp. 3022866 Bacteria Bacteria 50.1 3.99e-4   NR HNX78115.1 3022866 g32184 i0 41 0.490616621983914 61 36 49.1 0 185 3 63 123 HNX78115.1 ankyrin repeat domain-containing protein [Candidatus Rifleibacterium sp.] diamond 183 50.1 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota       Candidatus Rifleibacterium Candidatus Rifleibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;