RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA966993" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA966993 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3492602 3492602 PRJNA966993_P_NODE_14803_length_544_cov_3.055202_g14362_i0 PRJNA966993 14803 544 3.055202 16.62029888 Fimbriimonas ginsengisoli 1005039 Bacteria Bacteria 58.4 0.001   NTclustered gi|663071213|gb|CP007139.1| 661478 g14362 i0 90.909 0.314338235294118 44 2 8 2 452 493 2441084 2441127 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 171 58.4 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
26899417 26899417 PRJNA966993_P_NODE_98281_length_241_cov_1.833333_g97829_i0 PRJNA966993 98281 241 1.833333 4.41833253 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 63.5 1.6e-9   NR MCW5937656.1 2682144 g97829 i0 48 2.82572614107884 75 36 89.6 3 221 6 108 182 MCW5937656.1 HDIG domain-containing protein [Fimbriimonadaceae bacterium] diamond 681 63.5 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27594706 27594706 PRJNA966993_P_NODE_39224_length_343_cov_2.314815_g38772_i0 PRJNA966993 39224 343 2.314815 7.93981545 Armatimonadota bacterium 2033014 Bacteria Bacteria 48.1 0.00138   NR MCL5103533.1 2033014 g38772 i0 56.1 0.673469387755102 41 18 35.9 0 161 39 138 178 MCL5103533.1 2-oxo acid dehydrogenase subunit E2 [Armatimonadota bacterium] diamond 231 48.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28005289 28005289 PRJNA966993_P_NODE_58205_length_287_cov_1.799065_g57753_i0 PRJNA966993 58205 287 1.799065 5.16331655 Armatimonadota bacterium 2033014 Bacteria Bacteria 65.1 8.29e-10   NR MEI6915611.1 2033014 g57753 i0 45.8 4.46341463414634 72 39 75.3 0 269 54 46 117 MEI6915611.1 ankyrin repeat domain-containing protein [Armatimonadota bacterium] diamond 1281 65.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30342417 30342417 PRJNA966993_P_NODE_8212_length_730_cov_2.318113_g7811_i0 PRJNA966993 8212 730 2.318113 16.9222249 Armatimonadota bacterium 2033014 Bacteria Bacteria 65.5 3.84e-8   NR MBS1718040.1 2033014 g7811 i0 51.3 0.312328767123288 76 35 30.8 2 723 499 24 98 MBS1718040.1 hypothetical protein [Armatimonadota bacterium] diamond 228 65.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30373851 30373851 PRJNA966993_P_NODE_73792_length_264_cov_2.015707_g73340_i0 PRJNA966993 73792 264 2.015707 5.32146648 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 43.5 0.0255   NR CAA9240315.1 157466 g73340 i0 44.1 0.670454545454545 59 26 65.9 3 238 65 602 654 CAA9240315.1 hypothetical protein AVDCRST_MAG63-1504, partial [uncultured Armatimonadetes bacterium] diamond 177 43.5 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;