RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where bioproject = "PRJNA966993" and tax_kingdom = "Orthornavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 13 ✖

bioproject 1

  • PRJNA966993 · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1265524 1265524 PRJNA966993_P_NODE_40901_length_337_cov_1.166667_g40449_i0 PRJNA966993 40901 337 1.166667 3.93166779 root 1 Root_unresolved Root_unresolved 610 4.18e-170   NTclustered gi|62011|emb|X17008.1| 12730 g40449 i0 99.407 51.6824925816024 337 1 100 1 1 337 1314 979 Sendai virus polymerase (P) gene (strain fushimi) blastn 17417 616 0.99025974025974 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Respirovirus Respirovirus laryngotracheitidis
2217343 2217343 PRJNA966993_P_NODE_2_length_8533_cov_92.980024_g1_i0 PRJNA966993 2 8533 92.980024 7933.98544792 Picornaviridae sp. 1530251 Viruses Viruses 8564 0   NTclustered gi|2780183578|gb|PP818844.1| 1530251 g1 i0 86.569 0.916207664361889 7818 988 91 56 1 7789 7785 1 Picornaviridae sp. polyprotein and capsid protein genes, complete cds blastn 7818 8564 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
16245522 16245522 PRJNA966993_P_NODE_98993_length_241_cov_0.916667_g98541_i0 PRJNA966993 98993 241 0.916667 2.20916747 Mitovirus sp. 2587224 Viruses Viruses 130 9.74e-26   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g98541 i0 89.32 0.817427385892116 103 11 43 0 139 241 116 14 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 197 130 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
17520321 17520321 PRJNA966993_P_NODE_57254_length_288_cov_3.786047_g56802_i0 PRJNA966993 57254 288 3.786047 10.90381536 Mitovirus sp. 2587224 Viruses Viruses 126 1.5499999999999998e-24   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g56802 i0 95 0.277777777777778 80 4 28 0 185 264 112 33 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 80 126 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
26677382 26677382 PRJNA966993_P_NODE_50461_length_305_cov_1.659483_g50009_i0 PRJNA966993 50461 305 1.659483 5.06142315 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 46.6 0.00355   NR XCM67837.1 3003959 g50009 i0 30.2 1.04262295081967 106 63 95.4 2 299 9 27 130 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 318 46.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
27531393 27531393 PRJNA966993_P_NODE_10123_length_658_cov_2.058120_g9700_i0 PRJNA966993 10123 658 2.05812 13.5424296 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 133 1.1e-31   NR XCM67837.1 3003959 g9700 i0 56.3 0.542553191489362 119 49 53.8 2 25 378 144 260 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 357 133 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
28320755 28320755 PRJNA966993_P_NODE_6026_length_843_cov_2.051948_g5656_i0 PRJNA966993 6026 843 2.051948 17.29792164 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 200 4.3599999999999997e-54   NR XCM67837.1 3003959 g5656 i0 37.5 0.97864768683274 275 167 96.8 4 838 23 941 1213 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 825 200 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
28478698 28478698 PRJNA966993_P_NODE_46_length_4551_cov_5.438589_g38_i0 PRJNA966993 46 4551 5.438589 247.51018539 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 628 2.49e-192   NR XCM67837.1 3003959 g38 i0 61.8 0.312458800263678 474 181 31.2 0 4549 3128 1287 1760 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 1422 628 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
28984128 28984128 PRJNA966993_P_NODE_22688_length_441_cov_2.048913_g22241_i0 PRJNA966993 22688 441 2.048913 9.03570633 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 119 4.27e-28   NR XCM67837.1 3003959 g22241 i0 57.4 0.73469387755102 108 44 73.5 1 439 116 768 873 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 324 119 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
29425638 29425638 PRJNA966993_P_NODE_10809_length_638_cov_2.759292_g10381_i0 PRJNA966993 10809 638 2.759292 17.60428296 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 257 3.76e-75   NR XCM67837.1 3003959 g10381 i0 56.6 0.996865203761755 212 92 99.7 0 638 3 467 678 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 636 257 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
31194494 31194494 PRJNA966993_P_NODE_10315_length_652_cov_2.126079_g9891_i0 PRJNA966993 10315 652 2.126079 13.86203508 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 102 5e-21   NR XCM67837.1 3003959 g9891 i0 39 0.73159509202454 159 91 71.8 3 472 5 310 465 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 477 102 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
31606149 31606149 PRJNA966993_P_NODE_79776_length_254_cov_2.751381_g79324_i0 PRJNA966993 79776 254 2.751381 6.98850774 Durnavirales sp. 2809355 Viruses Viruses 61.6 9.28e-9   NR WRQ64726.1 2809355 g79324 i0 40.7 0.956692913385827 81 47 95.7 1 254 12 402 481 WRQ64726.1 RNA-dependent RNA polymerase, partial [Durnavirales sp.] diamond 243 61.6 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Durnavirales sp.
32618239 32618239 PRJNA966993_P_NODE_59920_length_285_cov_1.301887_g59468_i0 PRJNA966993 59920 285 1.301887 3.71037795 Salarius guttatus piscichuvirus 2951531 Viruses Viruses 53.9 7.42e-6   NR YP_010840939.1 2951531 g59468 i0 47.8 2.09473684210526 69 35 71.6 1 206 3 1 69 YP_010840939.1 L protein [Hardyhead chuvirus] diamond 597 53.9 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Salarius guttatus piscichuvirus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;