RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA966993", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA966993 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12744833 12744833 PRJNA966993_P_NODE_41870_length_333_cov_1.480769_g41418_i0 PRJNA966993 41870 333 1.480769 4.93096077 Fungi 4751 Fungi Fungi 191 4.64e-58   NR KAG5455512.1 278681 g41418 i0 87.4 42.2522522522523 103 13 92.8 0 309 1 53 155 KAG5455512.1 MAG: FAD binding domain-containing protein [Olpidium bornovanus] diamond 14070 191 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
28674517 28674517 PRJNA966993_P_NODE_44887_length_322_cov_1.546185_g44435_i0 PRJNA966993 44887 322 1.546185 4.9787157 Opisthokonta 33154 Fungi Fungi 154 1.87e-45   NR KAG5463654.1 278681 g44435 i0 72.9 10.8913043478261 107 29 99.7 0 2 322 32 138 KAG5463654.1 MAG: ribosomal protein L18e/L15P, partial [Olpidium bornovanus] diamond 3507 155 0.993548387096774 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
31296065 31296065 PRJNA966993_P_NODE_73715_length_264_cov_2.371728_g73263_i0 PRJNA966993 73715 264 2.371728 6.26136192 Olpidiomycetes 2202807 Fungi Fungi 112 1.11e-27   NR KAG5459079.1 278681 g73263 i0 54.1 3.80681818181818 85 39 96.6 0 261 7 22 106 KAG5459079.1 MAG: dedicator of cytokinesis-domain-containing protein [Olpidium bornovanus] diamond 1005 112 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
31542939 31542939 PRJNA966993_P_NODE_63796_length_279_cov_1.495146_g63344_i0 PRJNA966993 63796 279 1.495146 4.17145734 Olpidium bornovanus 278681 Fungi Fungi 68.2 6.43e-11   NR KAG5460186.1 278681 g63344 i0 60 0.483870967741935 45 18 48.4 0 20 154 13 57 KAG5460186.1 MAG: hypothetical protein BJ554DRAFT_7798, partial [Olpidium bornovanus] diamond 135 68.2 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;