RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA966993", tax_clade = "Stenosarchaea group" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 7 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 7 ✖

bioproject 1

  • PRJNA966993 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12421074 12421074 PRJNA966993_P_NODE_22290_length_445_cov_1.685484_g21843_i0 PRJNA966993 22290 445 1.685484 7.5004038 Halorutilales archaeon Cl-col2-1 3242703 Archaea Archaea 54.7 0.012   NTclustered gi|2801083086|gb|CP169074.1| 3242703 g21843 i0 100 0.0651685393258427 29 0 7 0 2 30 912412 912384 Halorutilales archaeon Cl-col2-1 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halorutilales     Halorutilales archaeon Cl-col2-1
12421417 12421417 PRJNA966993_P_NODE_60150_length_284_cov_2.919431_g59698_i0 PRJNA966993 60150 284 2.919431 8.29118404 Halomarina rubra 2071873 Archaea Archaea 96.7 1.18e-21   NR WP_250873790.1 2071873 g59698 i0 50 0.992957746478873 94 46 99.3 1 282 1 23 115 WP_250873790.1 oxidoreductase [Halomarina rubra] diamond 282 96.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halomarina Halomarina rubra
13695817 13695817 PRJNA966993_P_NODE_4411_length_979_cov_2.591611_g4103_i0 PRJNA966993 4411 979 2.591611 25.37187169 Methanosarcinales archaeon 2250255 Archaea Archaea 627 5.91e-225   NR RYE83110.1 2250255 g4103 i0 94.5 0.995914198161389 325 18 99.6 0 977 3 55 379 RYE83110.1 MAG: translation elongation factor EF-1 subunit alpha, partial [Methanosarcinales archaeon] diamond 975 627 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
23894984 23894984 PRJNA966993_P_NODE_76439_length_260_cov_1.647059_g75987_i0 PRJNA966993 76439 260 1.647059 4.2823534 Salinibaculum marinum 3131993 Archaea Archaea 54.7 0.007   NTclustered gi|2700494403|gb|CP147838.1| 3131993 g75987 i0 100 0.111538461538462 29 0 11 0 41 69 145888 145916 Salinibaculum marinum strain SYNS191 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Salinibaculum Salinibaculum marinum
27752620 27752620 PRJNA966993_P_NODE_24904_length_422_cov_1.656160_g24457_i0 PRJNA966993 24904 422 1.65616 6.9889952 Methanoregula sp. 2052170 Archaea Archaea 57.8 1.33e-6   NR HZK31245.1 2052170 g24457 i0 29.2 3.69668246445498 130 88 91 2 39 422 15 142 HZK31245.1 AMP-binding protein [Methanoregula sp.] diamond 1560 57.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
28320767 28320767 PRJNA966993_P_NODE_70366_length_269_cov_4.846939_g69914_i0 PRJNA966993 70366 269 4.846939 13.03826591 Methanomicrobiales archaeon 2184052 Archaea Archaea 52.4 4.93e-6   NR MEI7649696.1 2184052 g69914 i0 51 1.66171003717472 49 21 54.6 1 118 264 8 53 MEI7649696.1 ester cyclase [Methanomicrobiales archaeon] diamond 447 52.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
30626023 30626023 PRJNA966993_P_NODE_30933_length_382_cov_1.495146_g30481_i0 PRJNA966993 30933 382 1.495146 5.71145772 Methanoregula sp. 2052170 Archaea Archaea 67.8 3.12e-10   NR WP_373007287.1 2052170 g30481 i0 38 0.950261780104712 121 51 82.5 5 338 24 126 238 WP_373007287.1 TIGR03768 family metallophosphoesterase [Methanoregula sp.] diamond 363 67.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;