RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where bioproject = "PRJNA966993", tax_clade = "Sar" and tax_phylum = "Cercozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 18 ✖

tax_clade 1

  • Sar · 18 ✖

bioproject 1

  • PRJNA966993 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8594891 8594891 PRJNA966993_P_NODE_1247_length_1666_cov_4.180163_g1107_i0 PRJNA966993 1247 1666 4.180163 69.64151558 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 697 4.09e-248   NR MES1909605.1 1215613 g1107 i0 77.6 4.77370948379352 433 97 78 0 21 1319 1 433 MES1909605.1 hypothetical protein [Cercozoa sp. M6MM] diamond 7953 701 0.994293865905849 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
8595107 8595107 PRJNA966993_P_NODE_35547_length_359_cov_2.006993_g35095_i0 PRJNA966993 35547 359 2.006993 7.20510487 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 235 3.1499999999999996e-57   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g35095 i0 80.793 28.3649025069638 328 39 91 17 1 325 3733 4039 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 10183 235 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
10194306 10194306 PRJNA966993_P_NODE_43708_length_326_cov_2.434783_g43256_i0 PRJNA966993 43708 326 2.434783 7.93739258 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 148 1.79e-41   NR MES1911029.1 1215613 g43256 i0 67 1.03067484662577 112 33 99.4 1 326 3 88 199 MES1911029.1 hypothetical protein [Cercozoa sp. M6MM] diamond 336 148 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
11145714 11145714 PRJNA966993_P_NODE_32009_length_376_cov_2.495050_g31557_i0 PRJNA966993 32009 376 2.49505 9.381388 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 625 1.6799999999999998e-174   NTclustered gi|238617602|gb|FJ973377.1| 188950 g31557 i0 96.561 24.5212765957447 378 11 100 2 1 376 469 846 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 9220 625 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
12421443 12421443 PRJNA966993_P_NODE_62970_length_280_cov_2.082126_g62518_i0 PRJNA966993 62970 280 2.082126 5.8299528 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 457 4.6799999999999996e-124   NTclustered gi|302026154|gb|GQ377660.1| 188950 g62518 i0 96.071 28.6571428571429 280 11 100 0 1 280 190 469 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 8024 457 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
14970405 14970405 PRJNA966993_P_NODE_78732_length_256_cov_1.819672_g78280_i0 PRJNA966993 78732 256 1.819672 4.65836032 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 138 1.61e-37   NR MES1911491.1 1215613 g78280 i0 77.1 2.91796875 83 19 97.3 0 250 2 242 324 MES1911491.1 Actin-related protein 2 [Cercozoa sp. M6MM] diamond 747 138 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
16245267 16245267 PRJNA966993_P_NODE_73773_length_264_cov_2.083770_g73321_i0 PRJNA966993 73773 264 2.08377 5.5011528 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 145 1.5e-42   NR ACF24571.1 67809 g73321 i0 81.7 1.86363636363636 82 15 93.2 0 262 17 67 148 ACF24571.1 ubiquitin-conjugating enzyme 2 [Gymnochlora stellata] diamond 492 146 0.993150684931507 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Gymnochlora Gymnochlora stellata
17520596 17520596 PRJNA966993_P_NODE_87194_length_248_cov_1.640000_g86742_i0 PRJNA966993 87194 248 1.64 4.0672 Gymnochlora stellata 67809 SAR_Eukaryotes SAR_Eukaryotes 153 5.02e-45   NR ACF24574.1 67809 g86742 i0 91.4 0.979838709677419 81 7 98 0 3 245 30 110 ACF24574.1 Ras-related small GTPase Rab5 [Gymnochlora stellata] diamond 243 153 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Gymnochlora Gymnochlora stellata
23894576 23894576 PRJNA966993_P_NODE_32179_length_375_cov_3.341060_g31727_i0 PRJNA966993 32179 375 3.34106 12.528975 Lecythium sp. 3678_261K 238773 SAR_Eukaryotes SAR_Eukaryotes 638 2.15e-178   NTclustered gi|33089893|gb|AY283756.1| 238773 g31727 i0 97.333 99.4666666666667 375 10 100 0 1 375 589 215 Lecythium sp. 3678_261K actin gene, partial cds blastn 37300 638 1 Eukaryota Sar   Cercozoa Thecofilosea Tectofilosida Chlamydophryidae Lecythium Lecythium sp. 3678_261K
25168316 25168316 PRJNA966993_P_NODE_43120_length_329_cov_0.890625_g42668_i0 PRJNA966993 43120 329 0.890625 2.93015625 Lecythium sp. 3678_261K 238773 SAR_Eukaryotes SAR_Eukaryotes 331 3.55e-86   NTclustered gi|33089893|gb|AY283756.1| 238773 g42668 i0 96.059 71.0030395136778 203 8 62 0 126 328 765 563 Lecythium sp. 3678_261K actin gene, partial cds blastn 23360 331 1 Eukaryota Sar   Cercozoa Thecofilosea Tectofilosida Chlamydophryidae Lecythium Lecythium sp. 3678_261K
28005299 28005299 PRJNA966993_P_NODE_68365_length_272_cov_3.000000_g67913_i0 PRJNA966993 68365 272 3 8.16 Cercomonas sp. ATCC 5 1979794 SAR_Eukaryotes SAR_Eukaryotes 138 8.36e-37   NR CAE46439.1 45112 g67913 i0 76.1 0.970588235294118 88 21 97.1 0 271 8 239 326 CAE46439.1 RNA polymerase II largest subunit, partial [Cercomonas sp. ATCC 50318] diamond 264 138 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. ATCC 50318
30152023 30152023 PRJNA966993_P_NODE_52412_length_299_cov_2.384956_g51960_i0 PRJNA966993 52412 299 2.384956 7.13101844 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 91.3 5.74e-19   NR MES1912280.1 1215613 g51960 i0 48.4 3.62207357859532 91 47 91.3 0 27 299 402 492 MES1912280.1 hypothetical protein [Cercozoa sp. M6MM] diamond 1083 91.3 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30531311 30531311 PRJNA966993_P_NODE_50953_length_304_cov_1.000000_g50501_i0 PRJNA966993 50953 304 1 3.04 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 84.3 2.31e-17   NR MES1912193.1 1215613 g50501 i0 56 3.59210526315789 84 37 82.9 0 268 17 6 89 MES1912193.1 60S ribosomal protein L7B [Cercozoa sp. M6MM] diamond 1092 84.3 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31163027 31163027 PRJNA966993_P_NODE_36935_length_353_cov_1.453571_g36483_i0 PRJNA966993 36935 353 1.453571 5.13110563 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 93.6 1.94e-19   NR MES1907101.1 1215613 g36483 i0 39.3 2.96600566572238 117 68 98.6 2 350 3 494 608 MES1907101.1 hypothetical protein [Cercozoa sp. M6MM] diamond 1047 93.6 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31447997 31447997 PRJNA966993_P_NODE_77116_length_259_cov_1.639785_g76664_i0 PRJNA966993 77116 259 1.639785 4.24704315 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 70.1 9.64e-12   NR MES1913896.1 1215613 g76664 i0 46.4 1.92277992277992 84 44 97.3 1 257 6 41 123 MES1913896.1 hypothetical protein [Cercozoa sp. M6MM] diamond 498 70.1 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32397140 32397140 PRJNA966993_P_NODE_44419_length_324_cov_1.227092_g43967_i0 PRJNA966993 44419 324 1.227092 3.97577808 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 78.6 1.54e-14   NR MES1917378.1 1215613 g43967 i0 39.8 0.814814814814815 88 53 81.5 0 48 311 1 88 MES1917378.1 hypothetical protein [Cercozoa sp. M6MM] diamond 264 78.6 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32492142 32492142 PRJNA966993_P_NODE_57579_length_288_cov_1.432558_g57127_i0 PRJNA966993 57579 288 1.432558 4.12576704 Bigelowiella natans 227086 SAR_Eukaryotes SAR_Eukaryotes 105 2.39e-26   NR AAT09092.1 227086 g57127 i0 58 1.83333333333333 81 34 84.4 0 287 45 29 109 AAT09092.1 RAS-like GTPase [Bigelowiella natans] diamond 528 105 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Bigelowiella Bigelowiella natans
32838580 32838580 PRJNA966993_P_NODE_36680_length_354_cov_1.644128_g36228_i0 PRJNA966993 36680 354 1.644128 5.82021312 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 88.6 9.56e-18   NR MES1909935.1 1215613 g36228 i0 47.4 3.72881355932203 95 50 80.5 0 331 47 337 431 MES1909935.1 hypothetical protein [Cercozoa sp. M6MM] diamond 1320 88.6 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;