RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA966993", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA966993 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29425646 29425646 PRJNA966993_P_NODE_17589_length_499_cov_1.671362_g17147_i0 PRJNA966993 17589 499 1.671362 8.34009638 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 79 1.94e-15   NR RKY33608.1 2035772 g17147 i0 53.7 0.949899799599198 67 31 40.3 0 244 444 54 120 RKY33608.1 MAG: hypothetical protein DRP68_01815 [Candidatus Omnitrophota bacterium] diamond 474 79 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32118718 32118718 PRJNA966993_P_NODE_70978_length_269_cov_1.178571_g70526_i0 PRJNA966993 70978 269 1.178571 3.17035599 PVC group 1783257 Bacteria Bacteria 47 0.00153   NR MDD4879381.1 2035772 g70526 i0 34.1 4.24907063197026 88 51 98.1 4 267 4 11 91 MDD4879381.1 NAD-dependent epimerase/dehydratase family protein [Candidatus Omnitrophota bacterium] diamond 1143 47 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;