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contig_metadata

23 rows where bioproject = "PRJNA966993", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 23 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 23 ✖

bioproject 1

  • PRJNA966993 · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
941952 941952 PRJNA966993_P_NODE_22561_length_442_cov_3.311653_g22114_i0 PRJNA966993 22561 442 3.311653 14.63750626 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 54.7 0.012   NTclustered gi|2874253728|emb|OY969570.1| 412054 g22114 i0 100 0.0656108597285068 29 0 7 0 311 339 155165 155193 MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
942012 942012 PRJNA966993_P_NODE_28841_length_394_cov_2.320872_g28389_i0 PRJNA966993 28841 394 2.320872 9.14423568 FCB group 1783270 Bacteria Bacteria 208 2.78e-63   NR HEY9229717.1 2026741 g28389 i0 72.9 14.8629441624365 129 35 98.2 0 3 389 74 202 HEY9229717.1 NADP-dependent isocitrate dehydrogenase [Gemmatimonadaceae bacterium] diamond 5856 208 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
3492801 3492801 PRJNA966993_P_NODE_35983_length_357_cov_1.661972_g35531_i0 PRJNA966993 35983 357 1.661972 5.93324004 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 125 1.68e-30   NR MBU8871279.1 2448054 g35531 i0 57 0.899159663865546 107 45 89.1 1 356 39 391 497 MBU8871279.1 S8 family serine peptidase [Gemmatimonadales bacterium] diamond 321 125 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
11469444 11469444 PRJNA966993_P_NODE_53849_length_295_cov_2.702703_g53397_i0 PRJNA966993 53849 295 2.702703 7.97297385 Longimicrobiales bacterium 2910168 Bacteria Bacteria 59.7 6e-8   NR HUE77705.1 2910168 g53397 i0 58.8 0.51864406779661 51 19 49.8 1 284 138 112 162 HUE77705.1 ABC transporter ATP-binding protein [Longimicrobiales bacterium] diamond 153 59.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
25168245 25168245 PRJNA966993_P_NODE_35440_length_360_cov_1.073171_g34988_i0 PRJNA966993 35440 360 1.073171 3.8634156 Gemmatirosa kalamazoonensis 861299 Bacteria Bacteria 60.2 2.04e-4   NTclustered gi|575456455|gb|CP007128.1| 861299 g34988 i0 94.737 0.105555555555556 38 2 11 0 323 360 4317957 4317920 Gemmatirosa kalamazoonesis strain KBS708, complete genome blastn 38 60.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatirosa Gemmatirosa kalamazoonensis
27437009 27437009 PRJNA966993_P_NODE_90103_length_246_cov_2.965318_g89651_i0 PRJNA966993 90103 246 2.965318 7.29468228 Longimicrobiaceae bacterium 3047548 Bacteria Bacteria 44.7 0.00776   NR HEX8903360.1 3047548 g89651 i0 38 2.68292682926829 71 43 86.6 1 235 23 256 325 HEX8903360.1 pitrilysin family protein [Longimicrobiaceae bacterium] diamond 660 44.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae   Longimicrobiaceae bacterium
27979829 27979829 PRJNA966993_P_NODE_89845_length_247_cov_0.885057_g89393_i0 PRJNA966993 89845 247 0.885057 2.18609079 Gemmatimonas 173479 Bacteria Bacteria 93.6 5.01e-20   NR HYW31584.1 1962908 g89393 i0 57.5 4.71255060728745 73 30 88.7 1 2 220 400 471 HYW31584.1 leishmanolysin-related zinc metalloendopeptidase [Gemmatimonas sp.] diamond 1164 94.4 0.991525423728813 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatimonas Gemmatimonas sp.
28636751 28636751 PRJNA966993_P_NODE_39927_length_340_cov_2.906367_g39475_i0 PRJNA966993 39927 340 2.906367 9.8816478 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 101 2.3000000000000003e-22   NR PYP03818.1 2026742 g39475 i0 66.7 6.95294117647059 78 19 62.6 1 126 338 63 140 PYP03818.1 MAG: citrate (Si)-synthase [Gemmatimonadota bacterium] diamond 2364 101 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
28800541 28800541 PRJNA966993_P_NODE_80047_length_254_cov_1.701657_g79595_i0 PRJNA966993 80047 254 1.701657 4.32220878 Pseudomonadati 3379134 Bacteria Bacteria 53.5 6.46e-6   NR MEO8478319.1 2026742 g79595 i0 39.5 4.83070866141732 76 36 79.1 3 8 208 270 344 MEO8478319.1 ectonucleotide pyrophosphatase/phosphodiesterase [Gemmatimonadota bacterium] diamond 1227 53.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29110225 29110225 PRJNA966993_P_NODE_101368_length_227_cov_3.383117_g100916_i0 PRJNA966993 101368 227 3.383117 7.67967559 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 42.4 0.0422   NR HEX2218471.1 2448054 g100916 i0 42.2 0.594713656387665 45 26 59.5 0 22 156 855 899 HEX2218471.1 DUF5916 domain-containing protein [Gemmatimonadales bacterium] diamond 135 42.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
30120561 30120561 PRJNA966993_P_NODE_63192_length_280_cov_1.487923_g62740_i0 PRJNA966993 63192 280 1.487923 4.1661844 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 44.7 0.0119   NR MCZ6915570.1 2026742 g62740 i0 41.4 1.85357142857143 58 30 58.9 3 261 97 100 156 MCZ6915570.1 sodium:solute symporter family protein [Gemmatimonadota bacterium] diamond 519 44.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30190093 30190093 PRJNA966993_P_NODE_2752_length_1208_cov_14.881057_g2508_i0 PRJNA966993 2752 1208 14.881057 179.76316856 Gemmatimonadota 142182 Bacteria Bacteria 177 5.33e-45   NR HEY2377597.1 2026741 g2508 i0 42.3 2.44619205298013 272 138 65.1 9 845 60 541 803 HEY2377597.1 Ig-like domain-containing protein [Gemmatimonadaceae bacterium] diamond 2955 178 0.99438202247191 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
30499864 30499864 PRJNA966993_P_NODE_50493_length_305_cov_1.435345_g50041_i0 PRJNA966993 50493 305 1.435345 4.37780225 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 119 5.47e-31   NR MFN8579683.1 2026741 g50041 i0 60.4 4.95737704918033 101 39 99.3 1 2 304 103 202 MFN8579683.1 hypothetical protein [Gemmatimonadaceae bacterium] diamond 1512 119 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
30594475 30594475 PRJNA966993_P_NODE_48693_length_310_cov_2.848101_g48241_i0 PRJNA966993 48693 310 2.848101 8.8291131 Longimicrobiales bacterium 2910168 Bacteria Bacteria 44.3 0.0217   NR MDX1493820.1 2910168 g48241 i0 32.9 0.764516129032258 79 51 74.5 1 5 235 123 201 MDX1493820.1 DUF2157 domain-containing protein [Longimicrobiales bacterium] diamond 237 44.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
30759002 30759002 PRJNA966993_P_NODE_58014_length_287_cov_2.878505_g57562_i0 PRJNA966993 58014 287 2.878505 8.26130935 Gaopeijia 3381669 Bacteria Bacteria 52.8 1.9e-5   NR MEX2471136.1 2026742 g57562 i0 35.5 1.79790940766551 62 34 59.6 2 116 286 403 463 MEX2471136.1 choice-of-anchor B family protein [Gemmatimonadota bacterium] diamond 516 53.1 0.994350282485876 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31005333 31005333 PRJNA966993_P_NODE_100294_length_236_cov_2.588957_g99842_i0 PRJNA966993 100294 236 2.588957 6.10993852 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 59.3 4.72e-8   NR HMG11711.1 2026741 g99842 i0 48 0.953389830508475 75 35 95.3 2 227 3 23 93 HMG11711.1 serine hydrolase domain-containing protein [Gemmatimonadaceae bacterium] diamond 225 59.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
31068721 31068721 PRJNA966993_P_NODE_2775_length_1204_cov_8.121132_g2529_i0 PRJNA966993 2775 1204 8.121132 97.77842928 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 181 4.75e-48   NR HEY9015267.1 2448054 g2529 i0 36.1 4.31063122923588 335 187 79.2 10 211 1164 165 489 HEY9015267.1 leishmanolysin-related zinc metalloendopeptidase [Gemmatimonadales bacterium] diamond 5190 181 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
31169414 31169414 PRJNA966993_P_NODE_53915_length_295_cov_1.756757_g53463_i0 PRJNA966993 53915 295 1.756757 5.18243315 Pseudomonadati 3379134 Bacteria Bacteria 160 9.31e-46   NR MDZ4390681.1 2448054 g53463 i0 76.8 4.81016949152542 95 22 96.6 0 10 294 156 250 MDZ4390681.1 polysaccharide biosynthesis protein [Gemmatimonadales bacterium] diamond 1419 160 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
31200825 31200825 PRJNA966993_P_NODE_91975_length_245_cov_1.790698_g91523_i0 PRJNA966993 91975 245 1.790698 4.3872101 Candidatus Benthicola 3056652 Bacteria Bacteria 57.4 2.55e-7   NR MBT8462304.1 2026742 g91523 i0 39.7 3.33061224489796 68 41 83.3 0 40 243 91 158 MBT8462304.1 ATP-binding cassette domain-containing protein [Gemmatimonadota bacterium] diamond 816 57.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
31701028 31701028 PRJNA966993_P_NODE_93857_length_244_cov_0.900585_g93405_i0 PRJNA966993 93857 244 0.900585 2.1974274 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 57.8 1.77e-7   NR MEX2526951.1 2026742 g93405 i0 56.4 0.676229508196721 55 21 67.6 2 194 30 56 107 MEX2526951.1 hypothetical protein [Gemmatimonadota bacterium] diamond 165 57.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32523897 32523897 PRJNA966993_P_NODE_739_length_2009_cov_2.610537_g656_i0 PRJNA966993 739 2009 2.610537 52.44568833 Longimicrobiales bacterium 2910168 Bacteria Bacteria 116 9.99e-23   NR HKK92073.1 2910168 g656 i0 27.2 0.918367346938776 615 317 83.9 24 323 2008 645 1181 HKK92073.1 IPT/TIG domain-containing protein [Longimicrobiales bacterium] diamond 1845 116 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
32618243 32618243 PRJNA966993_P_NODE_64480_length_278_cov_1.502439_g64028_i0 PRJNA966993 64480 278 1.502439 4.17678042 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 101 5.249999999999999e-24   NR HET9066910.1 2448054 g64028 i0 60 0.863309352517986 80 32 86.3 0 28 267 84 163 HET9066910.1 YiiX/YebB-like N1pC/P60 family cysteine hydrolase [Gemmatimonadales bacterium] diamond 240 101 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
32750530 32750530 PRJNA966993_P_NODE_65080_length_277_cov_1.941176_g64628_i0 PRJNA966993 65080 277 1.941176 5.37705752 Bacteria 2 Bacteria Bacteria 58.5 1.95e-8   NR MBL0179116.1 2026742 g64628 i0 36.4 2.87003610108303 88 56 95.3 0 6 269 14 101 MBL0179116.1 aquaporin [Gemmatimonadota bacterium] diamond 795 58.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;