RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA966993", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 6 ✖

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA966993 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27784283 27784283 PRJNA966993_P_NODE_89724_length_247_cov_0.885057_g89272_i0 PRJNA966993 89724 247 0.885057 2.18609079 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 128 3.31e-33   NR MET0502820.1 2838779 g89272 i0 72 1.9919028340081 82 23 99.6 0 2 247 47 128 MET0502820.1 ABC transporter substrate-binding protein [Candidatus Binatia bacterium] diamond 492 128 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28984172 28984172 PRJNA966993_P_NODE_82568_length_251_cov_0.865169_g82116_i0 PRJNA966993 82568 251 0.865169 2.17157419 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 103 1.56e-24   NR MET0153938.1 2838779 g82116 i0 61.4 1.9840637450199201 83 29 99.2 1 249 1 227 306 MET0153938.1 oxidoreductase [Candidatus Binatia bacterium] diamond 498 103 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28990502 28990502 PRJNA966993_P_NODE_84188_length_250_cov_0.870056_g83736_i0 PRJNA966993 84188 250 0.870056 2.17514 Candidatus Binatus 2767079 Bacteria Bacteria 62.4 2.56e-9   NR HVN89955.1 2785449 g83736 i0 65.9 1.572 44 15 52.8 0 132 1 2 45 HVN89955.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Binataceae bacterium] diamond 393 62.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
30026031 30026031 PRJNA966993_P_NODE_4131_length_1008_cov_8.068449_g3834_i0 PRJNA966993 4131 1008 8.068449 81.32996592 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 206 2.22e-57   NR MBY0276389.1 2838779 g3834 i0 41.7 1.94642857142857 309 158 88.7 8 896 3 42 339 MBY0276389.1 hypothetical protein [Candidatus Binatia bacterium] diamond 1962 206 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30689264 30689264 PRJNA966993_P_NODE_52333_length_299_cov_2.858407_g51881_i0 PRJNA966993 52333 299 2.858407 8.54663693 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 81.6 1.4e-17   NR MFN8603255.1 2838779 g51881 i0 82.9 0.411371237458194 41 7 41.1 0 156 278 1 41 MFN8603255.1 zf-TFIIB domain-containing protein [Candidatus Binatia bacterium] diamond 123 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30752663 30752663 PRJNA966993_P_NODE_94494_length_244_cov_0.900585_g94042_i0 PRJNA966993 94494 244 0.900585 2.1974274 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 85.9 2.36e-17   NR GIW40371.1 2838779 g94042 i0 51.4 11.3606557377049 70 34 86.1 0 9 218 525 594 GIW40371.1 MAG: long-chain-acyl-CoA synthetase [Candidatus Binatia bacterium] diamond 2772 86.7 0.990772779700115 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;