contig_metadata
7 rows where bioproject = "PRJNA964500" and tax_phylum = "Mycoplasmatota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14019239 | 14019239 | PRJNA964500_S_NODE_11671_length_176_cov_2.204082_g11579_i0 | PRJNA964500 | 11671 | 176 | 2.204082 | 3.87918432 | Mycoplasma | 2093 | Bacteria | Bacteria | 135 | 1.43e-27 | NTclustered | gi|334192594|gb|CP002808.1| | 859194 | g11579 | i0 | 81.006 | 3.60795454545455 | 179 | 26 | 100 | 6 | 1 | 176 | 210060 | 210233 | Mycoplasma haemofelis Ohio2, complete genome | blastn | 635 | 135 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma haemofelis | ||
| 31353091 | 31353091 | PRJNA964500_S_NODE_6796_length_219_cov_1.868421_g6704_i0 | PRJNA964500 | 6796 | 219 | 1.868421 | 4.09184199 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 139 | 2.5e-41 | NR | WP_110555200.1 | 65123 | g6704 | i0 | 100 | 0.917808219178082 | 67 | 0 | 91.8 | 0 | 218 | 18 | 10 | 76 | WP_110555200.1 50S ribosomal protein L31 [Mycoplasma wenyonii] | diamond | 201 | 139 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 31574602 | 31574602 | PRJNA964500_S_NODE_6556_length_222_cov_2.839378_g6464_i0 | PRJNA964500 | 6556 | 222 | 2.839378 | 6.30341916 | Candidatus Mycoplasma haematobovis | 432608 | Bacteria | Bacteria | 90.5 | 4.51e-19 | NR | WP_187150740.1 | 432608 | g6464 | i0 | 72.7 | 1.48648648648649 | 55 | 15 | 74.3 | 0 | 222 | 58 | 87 | 141 | WP_187150740.1 hypothetical protein [Candidatus Mycoplasma haematobovis] | diamond | 330 | 90.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Candidatus Mycoplasma haematobovis | ||
| 31732463 | 31732463 | PRJNA964500_S_NODE_13617_length_166_cov_1.576642_g13525_i0 | PRJNA964500 | 13617 | 166 | 1.576642 | 2.61722572 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 105 | 1.89e-25 | NR | WP_112665901.1 | 65123 | g13525 | i0 | 100 | 0.993975903614458 | 55 | 0 | 99.4 | 0 | 166 | 2 | 42 | 96 | WP_112665901.1 hypothetical protein [Mycoplasma wenyonii] | diamond | 165 | 105 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 31764198 | 31764198 | PRJNA964500_S_NODE_14097_length_164_cov_1.651852_g14005_i0 | PRJNA964500 | 14097 | 164 | 1.651852 | 2.70903728 | Mycoplasma ovis | 171632 | Bacteria | Bacteria | 101 | 6.3299999999999986e-24 | NR | WP_024071110.1 | 171632 | g14005 | i0 | 83.3 | 0.98780487804878 | 54 | 9 | 98.8 | 0 | 3 | 164 | 260 | 313 | WP_024071110.1 DnaJ domain-containing protein [Mycoplasma ovis] | diamond | 162 | 101 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma ovis | ||
| 31922361 | 31922361 | PRJNA964500_S_NODE_17297_length_151_cov_2.434426_g17205_i0 | PRJNA964500 | 17297 | 151 | 2.434426 | 3.67598326 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 62.4 | 3.49e-11 | NR | WP_112665845.1 | 65123 | g17205 | i0 | 75.7 | 0.735099337748344 | 37 | 9 | 73.5 | 0 | 35 | 145 | 1 | 37 | WP_112665845.1 hypothetical protein [Mycoplasma wenyonii] | diamond | 111 | 62.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 32365581 | 32365581 | PRJNA964500_S_NODE_6639_length_221_cov_1.854167_g6547_i0 | PRJNA964500 | 6639 | 221 | 1.854167 | 4.09770907 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 93.2 | 1.44e-21 | NR | WP_112665629.1 | 65123 | g6547 | i0 | 84.3 | 0.692307692307692 | 51 | 8 | 69.2 | 0 | 177 | 25 | 91 | 141 | WP_112665629.1 restriction endonuclease PLD domain-containing protein [Mycoplasma wenyonii] | diamond | 153 | 93.2 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;