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contig_metadata

5 rows where bioproject = "PRJNA964500", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 5 ✖

tax_kingdom 1

  • Pseudomonadati · 5 ✖

bioproject 1

  • PRJNA964500 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2217043 2217043 PRJNA964500_S_NODE_10262_length_185_cov_6.673077_g10170_i0 PRJNA964500 10262 185 6.673077 12.34519245 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 228 2.4499999999999995e-55   NTclustered gi|2874253692|emb|OY969418.1| 171953 g10170 i0 89.944 858.789189189189 179 14 96 4 2 179 4232159 4232334 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 158876 228 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
2541091 2541091 PRJNA964500_S_NODE_12322_length_172_cov_6.706294_g12230_i0 PRJNA964500 12322 172 6.706294 11.53482568 Bacteria 2 Bacteria Bacteria 261 2.2000000000000002e-65   NTclustered gi|2874254027|emb|OY970352.1| 171953 g12230 i0 95.152 51.3662790697674 165 8 96 0 5 169 2365858 2365694 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 blastn 8835 261 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
8594809 8594809 PRJNA964500_S_NODE_3207_length_292_cov_37749.273764_g3115_i0 PRJNA964500 3207 292 37749.273764 110227.87939088 Acidobacteriota bacterium 1978231 Bacteria Bacteria 292 1.46e-74   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g3115 i0 89.03 176.845890410959 237 25 81 1 57 292 3298163 3298399 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 51639 292 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
9869955 9869955 PRJNA964500_S_NODE_11608_length_176_cov_6.925170_g11516_i0 PRJNA964500 11608 176 6.92517 12.1882992 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 172 1.09e-38   NTclustered gi|2874253692|emb|OY969418.1| 171953 g11516 i0 89.209 64.7329545454545 139 13 79 2 16 154 4233836 4233972 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 11393 172 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
14019279 14019279 PRJNA964500_S_NODE_3211_length_292_cov_202.064639_g3119_i0 PRJNA964500 3211 292 202.064639 590.02874588 Bacteria 2 Bacteria Bacteria 398 3.019999999999999e-106   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g3119 i0 94.231 140.380136986301 260 15 89 0 1 260 3300891 3300632 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 40991 398 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;