RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA964500", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA964500 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1265397 1265397 PRJNA964500_S_NODE_1461_length_387_cov_4.086592_g1369_i0 PRJNA964500 1461 387 4.086592 15.81511104 Metazoa 33208 Platyhelminthes Platyhelminthes 577 4.9299999999999986e-160   NTclustered gi|60687563|gb|AY914894.1| 6182 g1369 i0 99.683 101.279069767442 315 1 81 0 1 315 747 433 Schistosoma japonicum unknown mRNA blastn 39195 577 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
2541166 2541166 PRJNA964500_S_NODE_8802_length_197_cov_5.410714_g8710_i0 PRJNA964500 8802 197 5.410714 10.65910658 Rhabdocoela 27901 Platyhelminthes Platyhelminthes 71.3 4.71e-8   NTclustered gi|472441153|gb|KC529567.1| 1311926 g8710 i0 97.561 19.0761421319797 41 1 21 0 149 189 968 1008 Halammovortex sp. NVS-2013 isolate UH143.9 28S ribosomal RNA gene, partial sequence blastn 3758 71.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Dalyelliidae Halammovortex Halammovortex sp. NVS-2013
7643463 7643463 PRJNA964500_S_NODE_1306_length_402_cov_25819.168901_g1214_i0 PRJNA964500 1306 402 25819.168901 103793.05898202 Metazoa 33208 Platyhelminthes Platyhelminthes 640 6.47e-179   NTclustered gi|60687563|gb|AY914894.1| 6182 g1214 i0 100 86.0696517412935 346 0 86 0 1 346 98 443 Schistosoma japonicum unknown mRNA blastn 34600 640 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
22618954 22618954 PRJNA964500_S_NODE_6398_length_224_cov_17.553846_g6306_i0 PRJNA964500 6398 224 17.553846 39.32061504 Temnosewellia minor 216952 Platyhelminthes Platyhelminthes 104 5.42e-18   NTclustered gi|28273276|gb|AY157164.1| 216952 g6306 i0 85.714 1.0625 98 14 44 0 111 208 2781 2684 Temnosewellia minor 28S large subunit ribosomal RNA gene, partial sequence blastn 238 104 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Temnocephalidae Temnosewellia Temnosewellia minor

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;