RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA964500", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA964500 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21343888 21343888 PRJNA964500_S_NODE_10717_length_182_cov_2.078431_g10625_i0 PRJNA964500 10717 182 2.078431 3.78274442 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 230 6.659999999999998e-56   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g10625 i0 90.286 7.61538461538461 175 17 96 0 1 175 3495665 3495839 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 1386 230 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
29015698 29015698 PRJNA964500_S_NODE_15368_length_158_cov_3.046512_g15276_i0 PRJNA964500 15368 158 3.046512 4.81348896 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 45.4 0.0013   NR MFN8559329.1 2026734 g15276 i0 63.6 1.74683544303797 33 12 62.7 0 100 2 132 164 MFN8559329.1 enoyl-CoA hydratase-related protein [Dehalococcoidia bacterium] diamond 276 45.4 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;