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contig_metadata

20 rows where bioproject = "PRJNA964500", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 20 ✖

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA964500 · 20 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5093765 5093765 PRJNA964500_S_NODE_1184_length_417_cov_34.525773_g1093_i0 PRJNA964500 1184 417 34.525773 143.97247341 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 684 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1093 i0 97.97 72.89448441247 394 8 94 0 24 417 1492 1885 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 30397 684 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
6045013 6045013 PRJNA964500_S_NODE_1085_length_430_cov_8.785536_g995_i0 PRJNA964500 1085 430 8.785536 37.7778048 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 752 0   NTclustered gi|512134943|gb|JX178902.1| 1295638 g995 i0 99.048 94.7 420 3 98 1 7 426 1030 1448 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 40721 752 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
6045019 6045019 PRJNA964500_S_NODE_11285_length_178_cov_5.127517_g11193_i0 PRJNA964500 11285 178 5.127517 9.12698026 Vorticella sp. 1 2979179 SAR_Eukaryotes SAR_Eukaryotes 302 1.35e-77   NTclustered gi|2304601489|gb|OP458310.1| 2979179 g11193 i0 99.398 93.0674157303371 166 1 93 0 1 166 933 1098 Vorticella sp. 1 large subunit ribosomal RNA gene, partial sequence blastn 16566 302 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 1
6045092 6045092 PRJNA964500_S_NODE_8865_length_196_cov_324.131737_g8773_i0 PRJNA964500 8865 196 324.131737 635.29820452 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 281 1.99e-71   NTclustered gi|512134943|gb|JX178902.1| 1295638 g8773 i0 100 77.9540816326531 152 0 78 0 35 186 1823 1672 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15279 281 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
7643449 7643449 PRJNA964500_S_NODE_1026_length_437_cov_16.073529_g937_i0 PRJNA964500 1026 437 16.073529 70.24132173 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.012   NTclustered gi|390988043|gb|JN885111.1| 35097 g937 i0 100 0.528604118993135 29 0 7 0 207 235 1703 1675 Cohnilembus verminus isolate FXP2009051101 large subunit ribsomal RNA gene, partial sequence blastn 231 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Cohnilembidae Cohnilembus Cohnilembus verminus
8918308 8918308 PRJNA964500_S_NODE_1467_length_386_cov_14.445378_g1375_i0 PRJNA964500 1467 386 14.445378 55.75915908 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 595 1.3599999999999994e-165   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1375 i0 96.399 37.1088082901554 361 13 94 0 1 361 361 1 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 14324 595 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
9869966 9869966 PRJNA964500_S_NODE_1468_length_386_cov_12.616246_g1376_i0 PRJNA964500 1468 386 12.616246 48.69870956 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 556 6.41e-154   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1376 i0 94.46 42.8911917098446 361 20 94 0 1 361 361 1 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 16556 556 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
10194195 10194195 PRJNA964500_S_NODE_16368_length_154_cov_3.360000_g16276_i0 PRJNA964500 16368 154 3.36 5.1744 Sessilida 1974272 SAR_Eukaryotes SAR_Eukaryotes 285 1.14e-72   NTclustered gi|363412153|gb|JN120227.1| 60850 g16276 i0 100 100 154 0 100 0 1 154 626 779 Vorticella convallaria isolate 96Vorsp16 18S ribosomal RNA gene, partial sequence blastn 15400 285 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella convallaria
11145453 11145453 PRJNA964500_S_NODE_13309_length_167_cov_7.485507_g13217_i0 PRJNA964500 13309 167 7.485507 12.50079669 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 309 7.53e-80   NTclustered gi|512134943|gb|JX178902.1| 1295638 g13217 i0 100 100.017964071856 167 0 100 0 1 167 2431 2265 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16703 309 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
12744747 12744747 PRJNA964500_S_NODE_6650_length_220_cov_295.445026_g6558_i0 PRJNA964500 6650 220 295.445026 649.97905720000006 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 344 2.87e-90   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g6558 i0 100 85.7818181818182 186 0 85 0 1 186 1139 954 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 18872 344 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
14019260 14019260 PRJNA964500_S_NODE_15511_length_157_cov_9.328125_g15419_i0 PRJNA964500 15511 157 9.328125 14.64515625 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 281 1.52e-71   NTclustered gi|347439265|gb|JN111978.1| 151077 g15419 i0 99.355 100.165605095541 155 1 99 0 1 155 867 1021 Chilodonella uncinata strain USA_WH small subunit ribosomal RNA gene, partial sequence; macronuclear blastn 15726 281 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
14969760 14969760 PRJNA964500_S_NODE_1632_length_372_cov_11.830904_g1540_i0 PRJNA964500 1632 372 11.830904 44.01096288 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 562 1.32e-155   NTclustered gi|347439265|gb|JN111978.1| 151077 g1540 i0 95.251 78.8413978494624 358 12 96 5 17 372 912 558 Chilodonella uncinata strain USA_WH small subunit ribosomal RNA gene, partial sequence; macronuclear blastn 29329 562 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16244656 16244656 PRJNA964500_S_NODE_1513_length_381_cov_6.744318_g1421_i0 PRJNA964500 1513 381 6.744318 25.69585158 Caryotricha minuta 1004043 SAR_Eukaryotes SAR_Eukaryotes 207 7.33e-49   NTclustered gi|759083508|gb|KM222125.1| 1004043 g1421 i0 84.615 20.2808398950131 208 32 55 0 48 255 1076 1283 Caryotricha minuta voucher LWW07112802 large subunit ribosomal RNA gene, partial sequence blastn 7727 207 1 Eukaryota Sar   Ciliophora Spirotrichea Kiitrichida Kiitrichidae Caryotricha Caryotricha minuta
17519922 17519922 PRJNA964500_S_NODE_914_length_455_cov_160.190141_g826_i0 PRJNA964500 914 455 160.190141 728.86514155 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 695 0   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g826 i0 96.437 66.4351648351648 421 15 93 0 35 455 2332 1912 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 30228 695 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
19116842 19116842 PRJNA964500_S_NODE_11415_length_177_cov_13.891892_g11323_i0 PRJNA964500 11415 177 13.891892 24.58864884 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 292 8.09e-75   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g11323 i0 98.78 17.225988700565 164 2 93 0 1 164 1454 1291 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 3049 292 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
20391830 20391830 PRJNA964500_S_NODE_8816_length_197_cov_3.577381_g8724_i0 PRJNA964500 8816 197 3.577381 7.04744057 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 337 4.21e-88   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g8724 i0 97.462 8.58883248730965 197 5 100 0 1 197 2371 2567 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 1692 337 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
21343926 21343926 PRJNA964500_S_NODE_2077_length_342_cov_190.996805_g1985_i0 PRJNA964500 2077 342 190.996805 653.2090731 Planilamina ovata 2684848 SAR_Eukaryotes SAR_Eukaryotes 448 3.529999999999999e-121   NTclustered gi|1784308423|gb|MN830171.1| 2684848 g1985 i0 92.88 134.874269005848 309 20 90 2 1 308 1723 1416 Planilamina ovata isolate LJ-II-20170502 large subunit ribosomal RNA gene, partial sequence blastn 46127 448 1 Eukaryota Sar   Ciliophora Phyllopharyngea Dysteriida Kyaroikeidae Planilamina Planilamina ovata
21667791 21667791 PRJNA964500_S_NODE_4217_length_264_cov_40664.187234_g4125_i0 PRJNA964500 4217 264 40664.187234 107353.45429776 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 375 1.26e-99   NTclustered gi|363412153|gb|JN120227.1| 60850 g4125 i0 100 76.8939393939394 203 0 77 0 54 256 1465 1263 Vorticella convallaria isolate 96Vorsp16 18S ribosomal RNA gene, partial sequence blastn 20300 375 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella convallaria
23894381 23894381 PRJNA964500_S_NODE_7919_length_205_cov_370.068182_g7827_i0 PRJNA964500 7919 205 370.068182 758.6397731 Stentor sp. 1431124 SAR_Eukaryotes SAR_Eukaryotes 316 5.75e-82   NTclustered gi|1820251602|gb|MT175596.1| 1431124 g7827 i0 100 232.575609756098 171 0 83 0 1 171 100 270 Stentor sp. isolate CY2019012101 large subunit ribosomal RNA gene, partial sequence blastn 47678 316 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor sp.
25168012 25168012 PRJNA964500_S_NODE_980_length_442_cov_24005.903148_g891_i0 PRJNA964500 980 442 24005.903148 106106.09191416 Vorticella sp. 1 2979179 SAR_Eukaryotes SAR_Eukaryotes 689 0   NTclustered gi|2304601489|gb|OP458310.1| 2979179 g891 i0 99.734 78.8348416289593 376 1 85 0 11 386 1839 1464 Vorticella sp. 1 large subunit ribosomal RNA gene, partial sequence blastn 34845 689 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;