RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA951810" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA951810 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12416223 12416223 PRJNA951810_P_NODE_29690_length_368_cov_6.094915_g29348_i0 PRJNA951810 29690 368 6.094915 22.4292872 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.2 7.64e-16   NR KAJ4453711.1 342808 g29348 i0 58.8 1.10054347826087 68 24 55.4 2 368 165 7 70 KAJ4453711.1 putative 60S acidic ribosomal protein P1 [Paratrimastix pyriformis] diamond 405 78.2 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27025604 27025604 PRJNA951810_P_NODE_124602_length_277_cov_1.848039_g124257_i0 PRJNA951810 124602 277 1.848039 5.11906803 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 46.2 0.00344   NR XP_067719139.1 2049356 g124257 i0 31.4 1.86281588447653 86 57 91 2 252 1 454 539 XP_067719139.1 uncharacterized protein MONOS_14072 [Monocercomonoides exilis] diamond 516 46.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
32365450 32365450 PRJNA951810_P_NODE_47319_length_310_cov_6.367089_g46976_i0 PRJNA951810 47319 310 6.367089 19.7379759 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 64.7 1.3e-9   NR KAJ4456011.1 342808 g46976 i0 41.2 2.58387096774194 85 20 82.3 1 52 306 173 227 KAJ4456011.1 putative snRNA transcription factor [Paratrimastix pyriformis] diamond 801 64.7 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;