RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA951810", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA951810 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7314270 7314270 PRJNA951810_P_NODE_154786_length_254_cov_3.237569_g154441_i0 PRJNA951810 154786 254 3.237569 8.22342526 Potexvirus ecscacti 3433821 Viruses Viruses 460 3.2299999999999997e-125   NTclustered gi|2754804639|tpg|BK067217.1| 112227 g154441 i0 99.213 5 254 2 100 0 1 254 5810 5557 TPA_asm: Cactus virus X strain CN2017-1 RNA-dependent RNA polymerase, triple gene block protein 1, triple gene block protein 2, and capsid protein genes, complete cds blastn 1270 460 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus ecscacti
25162076 25162076 PRJNA951810_P_NODE_139780_length_266_cov_1.450777_g139435_i0 PRJNA951810 139780 266 1.450777 3.85906682 Orthoflavivirus denguei 3052464 Viruses Viruses 492 1.2099999999999999e-134   NTclustered gi|1920562960|gb|MW186239.1| 11060 g139435 i0 100 100 266 0 100 0 1 266 6562 6827 Dengue virus type 2 isolate DENV2TSM, complete genome blastn 26600 492 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Orthoflavivirus Orthoflavivirus denguei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;