RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA951810" and tax_phylum = "Candidatus Walliibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Walliibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA951810 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11140645 11140645 PRJNA951810_P_NODE_22249_length_425_cov_6.508523_g21911_i0 PRJNA951810 22249 425 6.508523 27.66122275 Pseudomonadati 3379134 Bacteria Bacteria 141 7.17e-36   NR MBI4866661.1 2053640 g21911 i0 55.7 7.03764705882353 140 60 98.1 2 418 2 429 567 MBI4866661.1 response regulator [Candidatus Wallbacteria bacterium] diamond 2991 142 0.992957746478873 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
32023696 32023696 PRJNA951810_P_NODE_50638_length_310_cov_5.383966_g50295_i0 PRJNA951810 50638 310 5.383966 16.6902946 Pseudomonadati 3379134 Bacteria Bacteria 73.9 9.29e-13   NR MBI4868979.1 2053640 g50295 i0 53.1 9.10645161290323 64 30 61.9 0 119 310 421 484 MBI4868979.1 TAT-variant-translocated molybdopterin oxidoreductase [Candidatus Wallbacteria bacterium] diamond 2823 73.9 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
32302325 32302325 PRJNA951810_P_NODE_42119_length_310_cov_9.540084_g41776_i0 PRJNA951810 42119 310 9.540084 29.5742604 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 62 1.38e-8   NR MBI2942799.1 2053640 g41776 i0 61.2 0.474193548387097 49 19 47.4 0 163 309 358 406 MBI2942799.1 SUMF1/EgtB/PvdO family nonheme iron enzyme [Candidatus Wallbacteria bacterium] diamond 147 62 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;