RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA951810" and tax_phylum = "Candidatus Ryaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Ryaniibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA951810 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27183591 27183591 PRJNA951810_P_NODE_24502_length_406_cov_4.375375_g24162_i0 PRJNA951810 24502 406 4.375375 17.7640225 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_ 2518621 Bacteria Bacteria 147 1.19e-39   NR OGZ45138.1 1802115 g24162 i0 53.4 0.982758620689655 133 62 98.3 0 6 404 129 261 OGZ45138.1 MAG: hypothetical protein A2756_03380 [Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27] diamond 399 147 1 Bacteria Bacteria candidate phyla   Candidatus Ryaniibacteriota         Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27
27721112 27721112 PRJNA951810_P_NODE_144844_length_262_cov_2.666667_g144499_i0 PRJNA951810 144844 262 2.666667 6.98666754 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_ 2518621 Bacteria Bacteria 52 2.58e-5   NR OGZ45290.1 1802115 g144499 i0 39.2 1.83206106870229 79 48 90.5 0 2 238 34 112 OGZ45290.1 MAG: hypothetical protein A2756_01565 [Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27] diamond 480 52 1 Bacteria Bacteria candidate phyla   Candidatus Ryaniibacteriota         Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27
28453541 28453541 PRJNA951810_P_NODE_23466_length_414_cov_8.580645_g23126_i0 PRJNA951810 23466 414 8.580645 35.5238703 Bacteria 2 Bacteria Bacteria 110 9e-26   NR OGZ45138.1 1802115 g23126 i0 46.5 1.83333333333333 127 67 91.3 1 36 413 10 136 OGZ45138.1 MAG: hypothetical protein A2756_03380 [Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27] diamond 759 110 1 Bacteria Bacteria candidate phyla   Candidatus Ryaniibacteriota         Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;