RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA951810", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA951810 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2210714 2210714 PRJNA951810_P_NODE_105422_length_289_cov_9.731481_g105078_i0 PRJNA951810 105422 289 9.731481 28.12398009 Patiria miniata 46514 Echinodermata other_Eukaryota 67.6 9.55e-7   NTclustered gi|1944934410|ref|XM_038222831.1| 46514 g105078 i0 97.436 2.30103806228374 39 1 13 0 12 50 691 729 PREDICTED: Patiria miniata serine-aspartate repeat-containing protein F-like (LOC119746059), transcript variant X2, mRNA blastn 665 67.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
14964236 14964236 PRJNA951810_P_NODE_16452_length_481_cov_6.107843_g16119_i0 PRJNA951810 16452 481 6.107843 29.37872483 Lytechinus pictus 7653 Echinodermata other_Eukaryota 54.7 0.013   NTclustered gi|2707400646|ref|XM_064113069.1| 7653 g16119 i0 100 0.361746361746362 29 0 6 0 383 411 6246 6274 PREDICTED: Lytechinus pictus zinc finger MIZ domain-containing protein 1-like (LOC129281907), transcript variant X3, mRNA blastn 174 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
21338007 21338007 PRJNA951810_P_NODE_135577_length_269_cov_2.443878_g135232_i0 PRJNA951810 135577 269 2.443878 6.57403182 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 120 4.11e-30   NR XP_041474081.1 7654 g135232 i0 77.3 2.94423791821561 66 15 73.6 0 268 71 19 84 XP_041474081.1 ethanolamine-phosphate cytidylyltransferase-like isoform X1 [Lytechinus variegatus] diamond 792 120 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
28320498 28320498 PRJNA951810_P_NODE_129766_length_273_cov_3.690000_g129421_i0 PRJNA951810 129766 273 3.69 10.0737 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 54.3 4.72e-6   NR XP_041478245.1 7654 g129421 i0 33.7 2.74725274725275 83 49 89 3 249 7 27 105 XP_041478245.1 mediator of RNA polymerase II transcription subunit 16-like [Lytechinus variegatus] diamond 750 54.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
28668004 28668004 PRJNA951810_P_NODE_127127_length_275_cov_2.925743_g126782_i0 PRJNA951810 127127 275 2.925743 8.04579325 Anneissia japonica 1529436 Echinodermata other_Eukaryota 73.2 1.04e-12   NR XP_033116011.1 1529436 g126782 i0 38.5 0.992727272727273 91 23 99.3 1 3 275 237 294 XP_033116011.1 aromatic-L-amino-acid decarboxylase-like [Anneissia japonica] diamond 273 73.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
28952225 28952225 PRJNA951810_P_NODE_103468_length_291_cov_2.408257_g103124_i0 PRJNA951810 103468 291 2.408257 7.00802787 Acanthaster planci 133434 Echinodermata other_Eukaryota 109 2.65e-25   NR XP_022092320.1 133434 g103124 i0 53.6 3.97938144329897 97 42 99 2 290 3 1058 1152 XP_022092320.1 regulatory-associated protein of mTOR-like isoform X4 [Acanthaster planci] diamond 1158 109 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;