RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA951810", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA951810 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26804020 26804020 PRJNA951810_P_NODE_137141_length_268_cov_1.569231_g136796_i0 PRJNA951810 137141 268 1.569231 4.20553908 Catenaria anguillulae PL171 765915 Fungi Fungi 61.6 7.2e-9   NR ORZ38361.1 765915 g136796 i0 34.1 0.951492537313433 85 56 95.1 0 255 1 31 115 ORZ38361.1 hypothetical protein BCR44DRAFT_47527 [Catenaria anguillulae PL171] diamond 255 61.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
32712473 32712473 PRJNA951810_P_NODE_166560_length_245_cov_2.424419_g166215_i0 PRJNA951810 166560 245 2.424419 5.93982655 Catenaria anguillulae PL171 765915 Fungi Fungi 46.6 7.7e-4   NR ORZ41233.1 765915 g166215 i0 53.5 0.52653061224489806 43 16 47.8 1 1 117 113 155 ORZ41233.1 Rho GTPase activation protein, partial [Catenaria anguillulae PL171] diamond 129 46.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;