contig_metadata
20 rows where bioproject = "PRJNA951810", tax_clade = "delta/epsilon subdivisions" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2212008 | 2212008 | PRJNA951810_P_NODE_185022_length_226_cov_2.816993_g184677_i0 | PRJNA951810 | 185022 | 226 | 2.816993 | 6.36640418 | Persicimonas caeni | 2292766 | Bacteria | Bacteria | 52.8 | 0.02 | NTclustered | gi|1695542189|gb|CP041186.1| | 2292766 | g184677 | i0 | 96.875 | 0.283185840707965 | 32 | 0 | 14 | 1 | 124 | 155 | 2713122 | 2713092 | Persicimonas caeni strain YN101 chromosome | blastn | 64 | 52.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Persicimonas | Persicimonas caeni | |||
| 13690752 | 13690752 | PRJNA951810_P_NODE_27291_length_385_cov_4.217949_g26949_i0 | PRJNA951810 | 27291 | 385 | 4.217949 | 16.23910365 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 163 | 1.6299999999999998e-35 | NTclustered | gi|2874254016|emb|OY970341.1| | 34034 | g26949 | i0 | 77.739 | 0.735064935064935 | 283 | 51 | 71 | 8 | 8 | 280 | 3170501 | 3170781 | MAG: uncultured delta proteobacterium isolate MFD01231.bin.c.2 genome assembly, chromosome: 1 | blastn | 283 | 163 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 13691343 | 13691343 | PRJNA951810_P_NODE_59551_length_310_cov_3.637131_g59208_i0 | PRJNA951810 | 59551 | 310 | 3.637131 | 11.2751061 | Bradymonas sediminis | 1548548 | Bacteria | Bacteria | 121 | 7.83e-23 | NTclustered | gi|1406952946|gb|CP030032.1| | 1548548 | g59208 | i0 | 84.553 | 0.525806451612903 | 123 | 18 | 39 | 1 | 16 | 137 | 4434837 | 4434959 | Bradymonas sediminis strain FA350 chromosome, complete genome | blastn | 163 | 121 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 17514174 | 17514174 | PRJNA951810_P_NODE_145414_length_261_cov_6.765957_g145069_i0 | PRJNA951810 | 145414 | 261 | 6.765957 | 17.65914777 | uncultured delta proteobacterium Rifle_16ft_4_minimus_1997 | 1665176 | Bacteria | Bacteria | 154 | 6.34e-33 | NTclustered | gi|874574400|gb|KT006970.1| | 1665176 | g145069 | i0 | 81.967 | 3.24137931034483 | 183 | 31 | 70 | 2 | 59 | 240 | 53040 | 52859 | Uncultured delta proteobacterium Rifle_16ft_4_minimus_1997 genomic sequence | blastn | 846 | 154 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium Rifle_16ft_4_minimus_1997 | ||||||
| 18787168 | 18787168 | PRJNA951810_P_NODE_105475_length_289_cov_8.791667_g105131_i0 | PRJNA951810 | 105475 | 289 | 8.791667 | 25.40791763 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 73.9 | 4.54e-13 | NR | OIN94809.1 | 1805124 | g105131 | i0 | 82.1 | 1.21453287197232 | 39 | 7 | 40.5 | 0 | 288 | 172 | 296 | 334 | OIN94809.1 MAG: hypothetical protein AUJ48_04430 [Deltaproteobacteria bacterium CG1_02_45_11] | diamond | 351 | 73.9 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium CG1_02_45_11 | ||||||
| 22612751 | 22612751 | PRJNA951810_P_NODE_123418_length_277_cov_9.176471_g123073_i0 | PRJNA951810 | 123418 | 277 | 9.176471 | 25.41882467 | Persicimonas caeni | 2292766 | Bacteria | Bacteria | 126 | 1.48e-24 | NTclustered | gi|1695542189|gb|CP041186.1| | 2292766 | g123073 | i0 | 83.582 | 13.7870036101083 | 134 | 22 | 48 | 0 | 143 | 276 | 6381799 | 6381666 | Persicimonas caeni strain YN101 chromosome | blastn | 3819 | 126 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Persicimonas | Persicimonas caeni | |||
| 26620577 | 26620577 | PRJNA951810_P_NODE_137241_length_267_cov_19.850515_g136896_i0 | PRJNA951810 | 137241 | 267 | 19.850515 | 53.00087505 | root | 1 | Root_unresolved | Root_unresolved | 80.1 | 7.85e-17 | NR | OGQ22850.1 | 1797862 | g136896 | i0 | 44.3 | 1.9438202247191 | 88 | 49 | 98.9 | 0 | 265 | 2 | 30 | 117 | OGQ22850.1 MAG: hypothetical protein A3C46_05215 [Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_44_16] | diamond | 519 | 80.9 | 0.990111248454882 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_44_16 | ||||||
| 26740435 | 26740435 | PRJNA951810_P_NODE_68001_length_309_cov_7.080508_g67657_i0 | PRJNA951810 | 68001 | 309 | 7.080508 | 21.87876972 | Lujinxingiaceae bacterium | 2946527 | Bacteria | Bacteria | 58.9 | 1.61e-7 | NR | MBA2663522.1 | 2946527 | g67657 | i0 | 65.1 | 1.36893203883495 | 43 | 15 | 41.7 | 0 | 2 | 130 | 8 | 50 | MBA2663522.1 serine/threonine protein kinase [Lujinxingiaceae bacterium] | diamond | 423 | 58.9 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Lujinxingiaceae | Lujinxingiaceae bacterium | ||||
| 26772554 | 26772554 | PRJNA951810_P_NODE_69341_length_308_cov_3.459574_g68997_i0 | PRJNA951810 | 69341 | 308 | 3.459574 | 10.65548792 | Deltaproteobacteria bacterium GWA2_43_19 | 1797804 | Bacteria | Bacteria | 63.2 | 5.49e-9 | NR | OGP12186.1 | 1797804 | g68997 | i0 | 32.6 | 0.925324675324675 | 95 | 58 | 92.5 | 1 | 23 | 307 | 813 | 901 | OGP12186.1 MAG: hypothetical protein A2Z89_09080 [Deltaproteobacteria bacterium GWA2_43_19] | diamond | 285 | 63.2 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium GWA2_43_19 | ||||||
| 27190088 | 27190088 | PRJNA951810_P_NODE_40762_length_310_cov_12.392405_g40419_i0 | PRJNA951810 | 40762 | 310 | 12.392405 | 38.4164555 | Myxococcota | 2818505 | Bacteria | Bacteria | 46.2 | 0.00468 | NR | OLC78306.1 | 1805121 | g40419 | i0 | 53.8 | 1.16129032258065 | 39 | 18 | 37.7 | 0 | 306 | 190 | 351 | 389 | OLC78306.1 MAG: hypothetical protein AUH83_02555 [Deltaproteobacteria bacterium 13_1_40CM_4_68_19] | diamond | 360 | 46.2 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium 13_1_40CM_4_68_19 | ||||||
| 27443317 | 27443317 | PRJNA951810_P_NODE_135143_length_269_cov_4.321429_g134798_i0 | PRJNA951810 | 135143 | 269 | 4.321429 | 11.62464401 | Bacteria | 2 | Bacteria | Bacteria | 59.7 | 5.58e-8 | NR | OGP12186.1 | 1797804 | g134798 | i0 | 37 | 4.49442379182156 | 81 | 51 | 90.3 | 0 | 24 | 266 | 189 | 269 | OGP12186.1 MAG: hypothetical protein A2Z89_09080 [Deltaproteobacteria bacterium GWA2_43_19] | diamond | 1209 | 59.7 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium GWA2_43_19 | ||||||
| 28131330 | 28131330 | PRJNA951810_P_NODE_26285_length_392_cov_4.319749_g25943_i0 | PRJNA951810 | 26285 | 392 | 4.319749 | 16.93341608 | Bradymonadales bacterium | 2099667 | Bacteria | Bacteria | 72 | 3.65e-13 | NR | TVQ80944.1 | 2099667 | g25943 | i0 | 38.1 | 0.964285714285714 | 126 | 72 | 91.8 | 1 | 31 | 390 | 1 | 126 | TVQ80944.1 MAG: hypothetical protein EA369_01235 [Bradymonadales bacterium] | diamond | 378 | 72 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadales bacterium | |||||
| 28888811 | 28888811 | PRJNA951810_P_NODE_146788_length_260_cov_6.096257_g146443_i0 | PRJNA951810 | 146788 | 260 | 6.096257 | 15.8502682 | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-2 | 2013747 | Bacteria | Bacteria | 74.7 | 2.48e-13 | NR | PKN39734.1 | 2013748 | g146443 | i0 | 51.6 | 0.715384615384615 | 62 | 30 | 71.5 | 0 | 2 | 187 | 117 | 178 | PKN39734.1 MAG: hypothetical protein CVU63_14490, partial [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20] | diamond | 186 | 74.7 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20 | ||||||
| 29173335 | 29173335 | PRJNA951810_P_NODE_78569_length_299_cov_4.765487_g78225_i0 | PRJNA951810 | 78569 | 299 | 4.765487 | 14.24880613 | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-2 | 2013747 | Bacteria | Bacteria | 58.5 | 1.96e-7 | NR | PKN33844.1 | 2013748 | g78225 | i0 | 47.5 | 0.612040133779264 | 61 | 21 | 50.2 | 1 | 209 | 60 | 23 | 83 | PKN33844.1 MAG: hypothetical protein CVU63_18140, partial [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20] | diamond | 183 | 58.5 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20 | ||||||
| 29204790 | 29204790 | PRJNA951810_P_NODE_115529_length_283_cov_2.752381_g115185_i0 | PRJNA951810 | 115529 | 283 | 2.752381 | 7.78923823 | SAR324 cluster bacterium | 2024889 | Bacteria | Bacteria | 134 | 1.5e-35 | NR | MDP7317134.1 | 2024889 | g115185 | i0 | 68.1 | 9.9434628975265 | 94 | 30 | 99.6 | 0 | 2 | 283 | 77 | 170 | MDP7317134.1 aminotransferase [SAR324 cluster bacterium] | diamond | 2814 | 134 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | SAR324 cluster bacterium | ||||||
| 30411661 | 30411661 | PRJNA951810_P_NODE_161413_length_249_cov_1.375000_g161068_i0 | PRJNA951810 | 161413 | 249 | 1.375 | 3.42375 | Bacteria | 2 | Bacteria | Bacteria | 67.8 | 4.51e-11 | NR | OQB09973.1 | 1852869 | g161068 | i0 | 41 | 2 | 83 | 48 | 100 | 1 | 1 | 249 | 141 | 222 | OQB09973.1 MAG: hypothetical protein BWY17_04432 [Deltaproteobacteria bacterium ADurb.Bin207] | diamond | 498 | 67.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium ADurb.Bin207 | ||||||
| 31005101 | 31005101 | PRJNA951810_P_NODE_102074_length_292_cov_1.867580_g101730_i0 | PRJNA951810 | 102074 | 292 | 1.86758 | 5.4533336 | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-2 | 2013747 | Bacteria | Bacteria | 68.9 | 4.05e-11 | NR | PKN39734.1 | 2013748 | g101730 | i0 | 57.1 | 0.503424657534247 | 49 | 21 | 50.3 | 0 | 14 | 160 | 130 | 178 | PKN39734.1 MAG: hypothetical protein CVU63_14490, partial [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20] | diamond | 147 | 68.9 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20 | ||||||
| 31416099 | 31416099 | PRJNA951810_P_NODE_166236_length_245_cov_4.104651_g165891_i0 | PRJNA951810 | 166236 | 245 | 4.104651 | 10.05639495 | Microvenator marinus | 2600177 | Bacteria | Bacteria | 55.5 | 1.24e-6 | NR | WP_146962556.1 | 2600177 | g165891 | i0 | 56.3 | 0.587755102040816 | 48 | 19 | 58.8 | 1 | 25 | 168 | 356 | 401 | WP_146962556.1 hypothetical protein [Microvenator marinus] | diamond | 144 | 55.5 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Microvenatoraceae | Microvenator | Microvenator marinus | |||
| 31675534 | 31675534 | PRJNA951810_P_NODE_47017_length_310_cov_6.476793_g46674_i0 | PRJNA951810 | 47017 | 310 | 6.476793 | 20.0780583 | Bdellovibrionota | 3018035 | Bacteria | Bacteria | 58.5 | 1.85e-7 | NR | OGQ93451.1 | 1797896 | g46674 | i0 | 56.5 | 1.21935483870968 | 46 | 20 | 44.5 | 0 | 172 | 309 | 1 | 46 | OGQ93451.1 MAG: hypothetical protein A2284_17825 [Deltaproteobacteria bacterium RIFOXYA12_FULL_61_11] | diamond | 378 | 58.9 | 0.99320882852292 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RIFOXYA12_FULL_61_11 | ||||||
| 32649264 | 32649264 | PRJNA951810_P_NODE_53440_length_310_cov_4.742616_g53097_i0 | PRJNA951810 | 53440 | 310 | 4.742616 | 14.7021096 | Deltaproteobacteria bacterium CG | 2026735 | Bacteria | Bacteria | 48.1 | 8.48e-4 | NR | PIU53429.1 | 1973972 | g53097 | i0 | 34.5 | 0.561290322580645 | 58 | 37 | 56.1 | 1 | 310 | 137 | 174 | 230 | PIU53429.1 MAG: hypothetical protein COS90_06140 [Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11] | diamond | 174 | 48.1 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium CG07_land_8_20_14_0_80_60_11 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;