RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA951810", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 7 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 7 ✖

bioproject 1

  • PRJNA951810 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26842490 26842490 PRJNA951810_P_NODE_19681_length_449_cov_5.478723_g19343_i0 PRJNA951810 19681 449 5.478723 24.59946627 Victivallis 172900 Bacteria Bacteria 83.2 8.33e-18   NR HCH87518.1 2053569 g19343 i0 62.1 1.76391982182628 66 25 44.1 0 448 251 16 81 HCH87518.1 50S ribosomal protein L7/L12 [Lentisphaeria bacterium] diamond 792 83.2 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
26899154 26899154 PRJNA951810_P_NODE_140741_length_265_cov_3.307292_g140396_i0 PRJNA951810 140741 265 3.307292 8.7643238 Lentisphaeria bacterium 2053569 Bacteria Bacteria 113 4.44e-28   NR MFA5205433.1 2053569 g140396 i0 66.7 0.984905660377358 87 29 98.5 0 263 3 169 255 MFA5205433.1 ABC transporter permease [Lentisphaeria bacterium] diamond 261 113 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
28225637 28225637 PRJNA951810_P_NODE_28946_length_373_cov_7.013333_g28604_i0 PRJNA951810 28946 373 7.013333 26.15973209 Lentisphaerota bacterium 1932692 Bacteria Bacteria 60.8 7.41e-8   NR MFH0878634.1 1932692 g28604 i0 40.2 0.699731903485255 87 45 68.4 3 6 260 403 484 MFH0878634.1 glycosyl hydrolase [Lentisphaerota bacterium] diamond 261 60.8 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
28516586 28516586 PRJNA951810_P_NODE_154007_length_254_cov_13.364641_g153662_i0 PRJNA951810 154007 254 13.364641 33.94618814 Bacteria 2 Bacteria Bacteria 65.1 2.59e-10   NR RMD82001.1 1932692 g153662 i0 86.7 1.55905511811024 30 4 35.4 0 254 165 212 241 RMD82001.1 MAG: G-D-S-L family lipolytic protein [Lentisphaerota bacterium] diamond 396 65.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
31074915 31074915 PRJNA951810_P_NODE_9295_length_616_cov_7.777164_g8996_i0 PRJNA951810 9295 616 7.777164 47.90733024 Pseudomonadati 3379134 Bacteria Bacteria 79.3 1.52e-15   NR MBT3379171.1 1932692 g8996 i0 63.9 1.46103896103896 61 22 29.7 0 5 187 19 79 MBT3379171.1 hypothetical protein [Lentisphaerota bacterium] diamond 900 79.3 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
32143784 32143784 PRJNA951810_P_NODE_64018_length_310_cov_2.974684_g63675_i0 PRJNA951810 64018 310 2.974684 9.2215204 Victivallales bacterium 2212475 Bacteria Bacteria 123 4.8399999999999994e-30   NR MFA6293318.1 2212475 g63675 i0 55.6 2.90322580645161 99 44 95.8 0 11 307 431 529 MFA6293318.1 LamG-like jellyroll fold domain-containing protein [Victivallales bacterium] diamond 900 123 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
32907801 32907801 PRJNA951810_P_NODE_122060_length_278_cov_7.034146_g121715_i0 PRJNA951810 122060 278 7.034146 19.55492588 Pseudomonadati 3379134 Bacteria Bacteria 111 3.1e-28   NR MBM4154196.1 1932692 g121715 i0 57.6 2.9136690647482 92 39 99.3 0 3 278 26 117 MBM4154196.1 nucleotidyl transferase [Lentisphaerota bacterium] diamond 810 111 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;