RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA951810", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 7 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 7 ✖

bioproject 1

  • PRJNA951810 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13689369 13689369 PRJNA951810_P_NODE_123651_length_277_cov_6.250000_g123306_i0 PRJNA951810 123651 277 6.25 17.3125 Fibrobacteraceae bacterium 2652288 Bacteria Bacteria 65.5 4.44e-10   NR HSQ41845.1 2652288 g123306 i0 47.9 1.5812274368231 71 31 76.9 1 36 248 118 182 HSQ41845.1 dihydroorotase [Fibrobacteraceae bacterium] diamond 438 65.5 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae   Fibrobacteraceae bacterium
27310363 27310363 PRJNA951810_P_NODE_177703_length_234_cov_8.173913_g177358_i0 PRJNA951810 177703 234 8.173913 19.12695642 Fibrobacter sp. 35828 Bacteria Bacteria 56.6 4.16e-7   NR WP_407447614.1 35828 g177358 i0 44.3 1.56410256410256 61 33 76.9 1 5 184 440 500 WP_407447614.1 ArnT family glycosyltransferase [Fibrobacter sp.] diamond 366 56.6 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
27846902 27846902 PRJNA951810_P_NODE_60564_length_310_cov_3.481013_g60221_i0 PRJNA951810 60564 310 3.481013 10.7911403 Fibrobacterota bacterium 2052160 Bacteria Bacteria 70.1 5.37e-12   NR MEK7394577.1 2052160 g60221 i0 54.5 2.72903225806452 66 25 59 1 308 126 161 226 MEK7394577.1 aquaporin Z [Fibrobacterota bacterium] diamond 846 70.1 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
28541866 28541866 PRJNA951810_P_NODE_20347_length_443_cov_5.562162_g20009_i0 PRJNA951810 20347 443 5.562162 24.64037766 Fibrobacterota bacterium 2052160 Bacteria Bacteria 67.8 2.93e-10   NR MDB5051195.1 2052160 g20009 i0 54.5 1.11060948081264 55 25 37.2 0 165 1 2 56 MDB5051195.1 hypothetical protein [Fibrobacterota bacterium] diamond 492 67.8 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
30594253 30594253 PRJNA951810_P_NODE_145293_length_261_cov_8.750000_g144948_i0 PRJNA951810 145293 261 8.75 22.8375 Fibrobacter sp. 35828 Bacteria Bacteria 71.6 3e-12   NR NLW32906.1 35828 g144948 i0 44 1.04597701149425 91 37 89.7 5 28 261 71 160 NLW32906.1 glycosyltransferase family 4 protein [Fibrobacter sp.] diamond 273 71.6 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
31416206 31416206 PRJNA951810_P_NODE_8636_length_639_cov_4.201413_g8342_i0 PRJNA951810 8636 639 4.201413 26.84702907 Fibrobacteria bacterium 2725311 Bacteria Bacteria 234 1.0899999999999998e-73   NR MCD6023365.1 2725311 g8342 i0 52.1 1.11737089201878 238 73 92.5 1 593 3 3 240 MCD6023365.1 NmrA family protein [Fibrobacteria bacterium] diamond 714 234 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
32017155 32017155 PRJNA951810_P_NODE_61198_length_310_cov_3.388186_g60855_i0 PRJNA951810 61198 310 3.388186 10.5033766 Chitinivibrionales bacterium 2663014 Bacteria Bacteria 52.4 3.24e-5   NR MDD5675719.1 2663014 g60855 i0 72.7 0.319354838709677 33 9 31.9 0 310 212 193 225 MDD5675719.1 DUF4118 domain-containing protein [Chitinivibrionales bacterium] diamond 99 52.4 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinivibrionia Chitinivibrionales     Chitinivibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;