contig_metadata
10 rows where bioproject = "PRJNA951412" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2210148 | 2210148 | PRJNA951412_P_NODE_8302_length_204_cov_4.694656_g8217_i0 | PRJNA951412 | 8302 | 204 | 4.694656 | 9.57709824 | Phytophthora sojae | 67593 | SAR_Eukaryotes | SAR_Eukaryotes | 200 | 6.01e-47 | NTclustered | gi|695433088|ref|XM_009532804.1| | 67593 | g8217 | i0 | 84.577 | 7.19607843137255 | 201 | 31 | 99 | 0 | 4 | 204 | 224 | 424 | Phytophthora sojae hypothetical protein mRNA | blastn | 1468 | 200 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora sojae | ||
| 4763161 | 4763161 | PRJNA951412_P_NODE_3524_length_265_cov_1.614583_g3439_i0 | PRJNA951412 | 3524 | 265 | 1.614583 | 4.27864495 | Phytophthora cambivora | 53983 | SAR_Eukaryotes | SAR_Eukaryotes | 254 | 6.19e-63 | NTclustered | gi|156987041|gb|EU080554.1| | 53983 | g3439 | i0 | 85.306 | 90.1584905660377 | 245 | 36 | 92 | 0 | 8 | 252 | 883 | 1127 | Phytophthora cambivora isolate PD_00043(P0592) heat shock protein 90 (HSP90) gene, partial cds | blastn | 23892 | 254 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cambivora | ||
| 11138508 | 11138508 | PRJNA951412_P_NODE_749_length_526_cov_2.317881_g664_i0 | PRJNA951412 | 749 | 526 | 2.317881 | 12.19205406 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 224 | 1.88e-66 | NR | GLD95430.1 | 114742 | g664 | i0 | 70 | 13.1692015209125 | 160 | 43 | 91.3 | 1 | 40 | 519 | 15 | 169 | GLD95430.1 hypothetical protein PINS_up004074 [Pythium insidiosum] | diamond | 6927 | 226 | 0.991150442477876 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium insidiosum | ||
| 21336897 | 21336897 | PRJNA951412_P_NODE_5197_length_249_cov_0.886364_g5112_i0 | PRJNA951412 | 5197 | 249 | 0.886364 | 2.20704636 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 196 | 9.84e-46 | NTclustered | gi|2795061008|ref|XM_067940276.1| | 4785 | g5112 | i0 | 82.589 | 38.0240963855422 | 224 | 37 | 90 | 2 | 27 | 249 | 429 | 207 | Phytophthora cinnamomi 60S ribosomal protein L23a (IUM83_15460), partial mRNA | blastn | 9468 | 196 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 21665093 | 21665093 | PRJNA951412_P_NODE_4777_length_250_cov_1.548023_g4692_i0 | PRJNA951412 | 4777 | 250 | 1.548023 | 3.8700575 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 137 | 6.08e-28 | NTclustered | gi|23394393|gb|AF424661.1| | 4787 | g4692 | i0 | 80.791 | 7.464 | 177 | 33 | 71 | 1 | 70 | 246 | 146 | 321 | Phytophthora infestans clone MY-10-D-12 cystathionine beta-synthase mRNA, complete cds | blastn | 1866 | 137 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora infestans | ||
| 27057262 | 27057262 | PRJNA951412_P_NODE_6502_length_246_cov_0.884393_g6417_i0 | PRJNA951412 | 6502 | 246 | 0.884393 | 2.17560678 | Pythium insidiosum | 114742 | SAR_Eukaryotes | SAR_Eukaryotes | 51.2 | 3.16e-5 | NR | KAJ0412788.1 | 114742 | g6417 | i0 | 46.3 | 0.658536585365854 | 54 | 29 | 65.9 | 0 | 81 | 242 | 172 | 225 | KAJ0412788.1 hypothetical protein ATCC90586_002418 [Pythium insidiosum] | diamond | 162 | 51.2 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium insidiosum | ||
| 27221543 | 27221543 | PRJNA951412_P_NODE_1982_length_330_cov_0.910506_g1897_i0 | PRJNA951412 | 1982 | 330 | 0.910506 | 3.0046698 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 117 | 6.26e-28 | NR | CCI46340.1 | 65357 | g1897 | i0 | 59.5 | 8.89090909090909 | 111 | 40 | 98.2 | 2 | 325 | 2 | 302 | 410 | CCI46340.1 unnamed protein product [Albugo candida] | diamond | 2934 | 117 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo candida | ||
| 29810916 | 29810916 | PRJNA951412_P_NODE_7831_length_242_cov_0.923077_g7746_i0 | PRJNA951412 | 7831 | 242 | 0.923077 | 2.23384634 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 113 | 9.73e-29 | NR | KAJ8525807.1 | 4785 | g7746 | i0 | 75.4 | 9.40909090909091 | 69 | 17 | 85.5 | 0 | 241 | 35 | 201 | 269 | KAJ8525807.1 hypothetical protein ON010_g15307 [Phytophthora cinnamomi] | diamond | 2277 | 114 | 0.991228070175439 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 30815457 | 30815457 | PRJNA951412_P_NODE_2914_length_284_cov_2.090047_g2829_i0 | PRJNA951412 | 2914 | 284 | 2.090047 | 5.93573348 | Thraustotheca clavata | 74557 | SAR_Eukaryotes | SAR_Eukaryotes | 102 | 8.449999999999999e-23 | NR | OQR95490.1 | 74557 | g2829 | i0 | 66.7 | 0.72887323943662 | 69 | 23 | 72.9 | 0 | 76 | 282 | 377 | 445 | OQR95490.1 pescadillo [Thraustotheca clavata] | diamond | 207 | 102 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata | ||
| 32333769 | 32333769 | PRJNA951412_P_NODE_3919_length_255_cov_1.681319_g3834_i0 | PRJNA951412 | 3919 | 255 | 1.681319 | 4.28736345 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 62.8 | 3.81e-9 | NR | KAH9158664.1 | 100861 | g3834 | i0 | 68.2 | 0.517647058823529 | 44 | 14 | 51.8 | 0 | 132 | 1 | 110 | 153 | KAH9158664.1 hypothetical protein LEN26_002820 [Aphanomyces euteiches] | diamond | 132 | 62.8 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;