RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA951412" and tax_phylum = "Cyanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA951412 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27916443 27916443 PRJNA951412_P_NODE_5485_length_248_cov_0.891429_g5400_i0 PRJNA951412 5485 248 0.891429 2.21074392 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 100 1.63e-22   NR WP_200666328.1 984206 g5400 i0 56.4 1.93548387096774 78 34 94.4 0 246 13 294 371 WP_200666328.1 aldehyde dehydrogenase [Oxynema sp. CENA135] diamond 480 100 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Oscillatoriales Oscillatoriaceae Oxynema Oxynema sp. CENA135
30190026 30190026 PRJNA951412_P_NODE_5652_length_248_cov_0.885714_g5567_i0 PRJNA951412 5652 248 0.885714 2.19657072 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 86.3 1.91e-17   NR WP_190465238.1 1246630 g5567 i0 47 6.96774193548387 83 43 99.2 1 246 1 60 142 WP_190465238.1 colicin uptake protein [Aerosakkonema funiforme] diamond 1728 86.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Aerosakkonematales Aerosakkonemataceae Aerosakkonema Aerosakkonema funiforme

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;