RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA951412" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA951412 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22940535 22940535 PRJNA951412_P_NODE_2718_length_291_cov_1.779817_g2633_i0 PRJNA951412 2718 291 1.779817 5.17926747 root 1 Root_unresolved Root_unresolved 89.7 8.08e-20   NR XP_020628443.1 48498 g2633 i0 65.3 18.0412371134021 72 23 74.2 1 44 259 7 76 XP_020628443.1 2-oxoglutarate dehydrogenase, mitochondrial-like [Orbicella faveolata] diamond 5250 90.5 0.991160220994475 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
27815548 27815548 PRJNA951412_P_NODE_824_length_504_cov_3.192575_g739_i0 PRJNA951412 824 504 3.192575 16.090578 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 155 1.6499999999999999e-43   NR XP_057289659.1 13093 g739 i0 73.8 1.29761904761905 107 28 63.7 0 504 184 155 261 XP_057289659.1 60S ribosomal protein L7a-like [Hydractinia symbiolongicarpus] diamond 654 155 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
28604696 28604696 PRJNA951412_P_NODE_927_length_471_cov_6.231156_g842_i0 PRJNA951412 927 471 6.231156 29.34874476 Acropora digitifera 70779 Cnidaria other_Eukaryota 134 2.47e-36   NR XP_015765847.1 70779 g842 i0 59.4 2.57324840764331 138 45 87.9 1 1 414 59 185 XP_015765847.1 PREDICTED: 60S ribosomal protein L35-like [Acropora digitifera] diamond 1212 134 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora digitifera
30032251 30032251 PRJNA951412_P_NODE_5411_length_249_cov_0.875000_g5326_i0 PRJNA951412 5411 249 0.875 2.17875 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 99.4 4.84e-22   NR XP_065649305.1 6087 g5326 i0 58.8 25.5903614457831 85 27 92.8 2 2 232 57 141 XP_065649305.1 kinesin-like protein KIF11-B isoform X2 [Hydra vulgaris] diamond 6372 100 0.994 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
30688966 30688966 PRJNA951412_P_NODE_7093_length_244_cov_0.906433_g7008_i0 PRJNA951412 7093 244 0.906433 2.21169652 Paramuricea clavata 317549 Cnidaria other_Eukaryota 45.8 0.00305   NR CAB3977173.1 317549 g7008 i0 55.9 1.04508196721311 34 15 41.8 0 1 102 292 325 CAB3977173.1 uncharacterized MFS-type transporter isoform X2 [Paramuricea clavata] diamond 255 45.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
31194233 31194233 PRJNA951412_P_NODE_3655_length_262_cov_1.211640_g3570_i0 PRJNA951412 3655 262 1.21164 3.1744968 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 84 1.54e-17   NR XP_020901513.1 2652724 g3570 i0 43.2 3.26335877862595 95 45 98.5 3 5 262 108 202 XP_020901513.1 gamma-interferon-inducible lysosomal thiol reductase-like [Exaiptasia diaphana] diamond 855 84 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
32838303 32838303 PRJNA951412_P_NODE_6840_length_245_cov_0.895349_g6755_i0 PRJNA951412 6840 245 0.895349 2.19360505 Acropora digitifera 70779 Cnidaria other_Eukaryota 65.1 1.52e-10   NR XP_015780666.1 70779 g6755 i0 48.8 2.77959183673469 82 37 99.2 3 245 3 113 190 XP_015780666.1 PREDICTED: 60S ribosomal protein L13-like [Acropora digitifera] diamond 681 65.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora digitifera

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;