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contig_metadata

29 rows where bioproject = "PRJNA951412" and tax_phylum = "Chlorophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA951412 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
934816 934816 PRJNA951412_P_NODE_301_length_897_cov_4.861650_g228_i0 PRJNA951412 301 897 4.86165 43.6090005 Chloropicon primus 1764295 Plants Plants 346 7.49e-116   NR QDZ22777.1 1764295 g228 i0 56.9 0.963210702341137 288 115 94 5 846 4 27 312 QDZ22777.1 cathepsin B cysteine protease [Chloropicon primus] diamond 864 346 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloropicon Chloropicon primus
2210063 2210063 PRJNA951412_P_NODE_2282_length_311_cov_1.882353_g2197_i0 PRJNA951412 2282 311 1.882353 5.85411783 Micromonas commoda 296587 Plants Plants 82.4 3.71e-11   NTclustered gi|255077212|ref|XM_002502208.1| 296587 g2197 i0 78.195 6.97749196141479 133 26 43 2 174 306 1201 1072 Micromonas commoda predicted protein partial mRNA blastn 2170 82.4 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
2210150 2210150 PRJNA951412_P_NODE_882_length_484_cov_4.386861_g797_i0 PRJNA951412 882 484 4.386861 21.23240724 Micromonas commoda 296587 Plants Plants 235 4.36e-57   NTclustered gi|255081109|ref|XM_002504075.1| 296587 g797 i0 82.182 28.6962809917355 275 47 57 2 7 280 1 274 Micromonas commoda predicted protein partial mRNA blastn 13889 235 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
3485443 3485443 PRJNA951412_P_NODE_1403_length_377_cov_2.029605_g1318_i0 PRJNA951412 1403 377 2.029605 7.65161085 root 1 Root_unresolved Root_unresolved 142 2.11e-36   NR KAJ9517333.1 44745 g1318 i0 66.1 18.7320954907162 124 42 98.7 0 1 372 1062 1185 KAJ9517333.1 hypothetical protein QJQ45_016698 [Haematococcus lacustris] diamond 7062 143 0.993006993006993 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
4763130 4763130 PRJNA951412_P_NODE_1044_length_440_cov_2.790191_g959_i0 PRJNA951412 1044 440 2.790191 12.2768404 Monoraphidium neglectum 145388 Plants Plants 65.8 5.46e-6   NTclustered gi|926786903|ref|XM_014046472.1| 145388 g959 i0 93.182 0.1 44 3 10 0 395 438 470 427 Monoraphidium neglectum hypothetical protein mRNA blastn 44 65.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
4763222 4763222 PRJNA951412_P_NODE_8264_length_216_cov_8.713287_g8179_i0 PRJNA951412 8264 216 8.713287 18.82069992 Micromonas commoda 296587 Plants Plants 183 6.48e-42   NTclustered gi|255072468|ref|XM_002499863.1| 296587 g8179 i0 87.117 25.7777777777778 163 19 75 2 51 212 190 29 Micromonas commoda predicted protein mRNA blastn 5568 183 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
6037923 6037923 PRJNA951412_P_NODE_3245_length_273_cov_3.455000_g3160_i0 PRJNA951412 3245 273 3.455 9.43215 Chlamydomonas sp. ICE-L 309537 Plants Plants 176 1.43e-39   NTclustered gi|1433048021|gb|MF780877.1| 309537 g3160 i0 84.971 61.2857142857143 173 26 63 0 101 273 16 188 Chlamydomonas sp. ICE-L heat shock protein 70A (HSP70A) mRNA, partial cds blastn 16731 176 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. ICE-L
6037965 6037965 PRJNA951412_P_NODE_6885_length_245_cov_0.889535_g6800_i0 PRJNA951412 6885 245 0.889535 2.17936075 Mantoniella tinhauana 3097027 Plants Plants 71.3 6.11e-8   NTclustered gi|2735153279|gb|CP140064.1| 3097027 g6800 i0 83.333 0.318367346938775 78 11 31 2 99 175 3034835 3034759 Mantoniella tinhauana isolate LFS chromosome 3 blastn 78 71.3 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
8915544 8915544 PRJNA951412_P_NODE_3627_length_262_cov_2.962963_g3542_i0 PRJNA951412 3627 262 2.962963 7.76296306 Chlorophyta 3041 Plants Plants 213 1.04e-50   NTclustered gi|760444702|ref|XM_011401118.1| 3075 g3542 i0 85.644 57.8282442748092 202 29 77 0 61 262 124 325 Auxenochlorella protothecoides 40S ribosomal protein S23-2 partial mRNA blastn 15151 213 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
14962636 14962636 PRJNA951412_P_NODE_272_length_949_cov_3.033105_g203_i0 PRJNA951412 272 949 3.033105 28.78416645 Chlorophyta 3041 Plants Plants 361 7.209999999999997e-110   NR KAL4858421.1 3077 g203 i0 65.9 11.2824025289779 258 88 81.6 0 12 785 81 338 KAL4858421.1 40S ribosomal protein S4 [Chlorella vulgaris] diamond 10707 364 0.991758241758242 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
16237586 16237586 PRJNA951412_P_NODE_1073_length_434_cov_1.282548_g988_i0 PRJNA951412 1073 434 1.282548 5.56625832 Mantoniella tinhauana 3097027 Plants Plants 337 1.0299999999999996e-87   NTclustered gi|2735153278|gb|CP140063.1| 3097027 g988 i0 80.866 85.0092165898618 439 74 100 9 1 434 631892 631459 Mantoniella tinhauana isolate LFS chromosome 2 blastn 36894 337 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
16237597 16237597 PRJNA951412_P_NODE_1873_length_335_cov_2.916031_g1788_i0 PRJNA951412 1873 335 2.916031 9.76870385 Chlorella variabilis 554065 Plants Plants 327 4.69e-85   NTclustered gi|552830805|ref|XM_005847928.1| 554065 g1788 i0 84.412 97.9731343283582 340 46 100 5 1 335 678 341 Chlorella variabilis hypothetical protein (RACK1) mRNA, complete cds blastn 32821 327 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
16237633 16237633 PRJNA951412_P_NODE_413_length_751_cov_4.455752_g331_i0 PRJNA951412 413 751 4.455752 33.46269752 Micromonas commoda 296587 Plants Plants 363 3.06e-95   NTclustered gi|255081970|ref|XM_002508158.1| 296587 g331 i0 80.679 60.9840213049268 471 87 62 4 255 723 509 41 Micromonas commoda predicted protein mRNA blastn 45799 363 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
22611799 22611799 PRJNA951412_P_NODE_2658_length_294_cov_1.407240_g2573_i0 PRJNA951412 2658 294 1.40724 4.1372856 Chloropicon primus 1764295 Plants Plants 162 8.649999999999999e-47   NR QDZ22777.1 1764295 g2573 i0 74.2 1.89795918367347 93 24 94.9 0 290 12 99 191 QDZ22777.1 cathepsin B cysteine protease [Chloropicon primus] diamond 558 162 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloropicon Chloropicon primus
22611802 22611802 PRJNA951412_P_NODE_2818_length_287_cov_4.658879_g2733_i0 PRJNA951412 2818 287 4.658879 13.37098273 Volvox carteri 3067 Plants Plants 76.8 1.57e-9   NTclustered gi|302838673|ref|XM_002950849.1| 3068 g2733 i0 97.727 0.327526132404181 44 1 15 0 222 265 770 727 Volvox carteri f. nagariensis component of cytosolic 80S ribosome and 60S large subunit (rpl8), mRNA blastn 94 76.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
25160905 25160905 PRJNA951412_P_NODE_1700_length_348_cov_1.872727_g1615_i0 PRJNA951412 1700 348 1.872727 6.51708996 Chlamydomonas incerta 51695 Plants Plants 207 6.65e-49   NTclustered gi|74272614|gb|DQ122872.1| 51695 g1615 i0 82.231 5.77011494252874 242 41 69 2 106 346 693 453 Chlamydomonas incerta mitochondrial ADP/ATP translocator (ANT) mRNA, complete cds; nuclear gene for mitochondrial product blastn 2008 207 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
27246852 27246852 PRJNA951412_P_NODE_4823_length_250_cov_0.881356_g4738_i0 PRJNA951412 4823 250 0.881356 2.20339 Chloropicon primus 1764295 Plants Plants 70.1 9.57e-12   NR QDZ21461.1 1764295 g4738 i0 75.6 1.092 45 11 54 0 250 116 729 773 QDZ21461.1 inorganic pyrophosphatase [Chloropicon primus] diamond 273 70.1 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloropicon Chloropicon primus
27569226 27569226 PRJNA951412_P_NODE_4364_length_252_cov_0.865922_g4279_i0 PRJNA951412 4364 252 0.865922 2.18212344 Chlamydomonadales 3042 Plants Plants 121 4.86e-30   NR XP_042926294.1 3055 g4279 i0 69.9 2.94047619047619 83 25 98.8 0 250 2 3 85 XP_042926294.1 uncharacterized protein CHLRE_03g189950v5 [Chlamydomonas reinhardtii] diamond 741 122 0.991803278688525 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
27657649 27657649 PRJNA951412_P_NODE_2844_length_287_cov_1.224299_g2759_i0 PRJNA951412 2844 287 1.224299 3.51373813 Micromonas pusilla CCMP1545 564608 Plants Plants 142 2.24e-37   NR XP_003064294.1 564608 g2759 i0 70 1.86062717770035 90 27 94.1 0 2 271 309 398 XP_003064294.1 papain family cysteine protease [Micromonas pusilla CCMP1545] diamond 534 142 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas pusilla
27721070 27721070 PRJNA951412_P_NODE_1064_length_436_cov_1.283747_g979_i0 PRJNA951412 1064 436 1.283747 5.59713692 Bryopsis sp. KO-2 3115439 Plants Plants 169 1.6999999999999998e-48   NR GMH37549.1 3041901 g979 i0 52.4 0.997706422018349 145 69 99.8 0 435 1 75 219 GMH37549.1 hypothetical protein BSKO_05422 [Bryopsis sp. KO-2023] diamond 435 169 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
27752371 27752371 PRJNA951412_P_NODE_4544_length_251_cov_0.876404_g4459_i0 PRJNA951412 4544 251 0.876404 2.19977404 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 51.6 4.25e-6   NR KAF6266637.1 2650976 g4459 i0 40 0.836653386454183 70 42 83.7 0 35 244 13 82 KAF6266637.1 transmembrane proteins 14C-domain-containing protein [Scenedesmus sp. NREL 46B-D3] diamond 210 51.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
28067890 28067890 PRJNA951412_P_NODE_2585_length_297_cov_1.745536_g2500_i0 PRJNA951412 2585 297 1.745536 5.18424192 Pedinophyceae sp. YPF-7 765719 Plants Plants 184 2.56e-53   NR CAG9464639.1 765719 g2500 i0 93.9 31.6767676767677 98 6 99 0 2 295 372 469 CAG9464639.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 9408 184 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
28793957 28793957 PRJNA951412_P_NODE_3987_length_253_cov_2.222222_g3902_i0 PRJNA951412 3987 253 2.222222 5.62222166 Prototheca wickerhamii 3111 Plants Plants 81.6 6.09e-17   NR KAK2076667.1 3111 g3902 i0 63.3 0.711462450592885 60 22 71.1 0 252 73 124 183 KAK2076667.1 hypothetical protein QBZ16_005427 [Prototheca wickerhamii] diamond 180 81.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
29305758 29305758 PRJNA951412_P_NODE_3969_length_254_cov_1.138122_g3884_i0 PRJNA951412 3969 254 1.138122 2.89082988 Opisthokonta 33154 Plants Plants 96.7 2.4900000000000004e-21   NR KAK3261591.1 36881 g3884 i0 55.7 1.90157480314961 79 32 89.8 1 246 19 270 348 KAK3261591.1 hypothetical protein CYMTET_29506 [Cymbomonas tetramitiformis] diamond 483 96.7 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
29463313 29463313 PRJNA951412_P_NODE_2330_length_309_cov_1.313559_g2245_i0 PRJNA951412 2330 309 1.313559 4.05889731 Eukaryota 2759 Plants Plants 156 4.7e-45   NR KAK9820033.1 41462 g2245 i0 73.7 26.7087378640777 99 26 96.1 0 11 307 1 99 KAK9820033.1 hypothetical protein WJX72_005304 [[Myrmecia] bisecta] diamond 8253 156 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
31454355 31454355 PRJNA951412_P_NODE_2836_length_287_cov_1.439252_g2751_i0 PRJNA951412 2836 287 1.439252 4.13065324 Chlorellaceae 35461 Plants Plants 124 7.09e-31   NR XP_005845202.1 554065 g2751 i0 57.4 3.93031358885017 94 40 98.3 0 286 5 382 475 XP_005845202.1 hypothetical protein CHLNCDRAFT_137433 [Chlorella variabilis] diamond 1128 124 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
31517607 31517607 PRJNA951412_P_NODE_2896_length_285_cov_1.457547_g2811_i0 PRJNA951412 2896 285 1.457547 4.15400895 root 1 Root_unresolved Root_unresolved 107 7.3699999999999985e-28   NR XP_002501744.1 296587 g2811 i0 52.2 5.83157894736842 92 44 96.8 0 277 2 9 100 XP_002501744.1 predicted protein, partial [Micromonas commoda] diamond 1662 107 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
32017007 32017007 PRJNA951412_P_NODE_2298_length_311_cov_1.197479_g2213_i0 PRJNA951412 2298 311 1.197479 3.72415969 Cymbomonas tetramitiformis 36881 Plants Plants 44.3 0.0231   NR KAK3239804.1 36881 g2213 i0 43.1 0.559485530546624 58 33 55.9 0 1 174 468 525 KAK3239804.1 hypothetical protein CYMTET_50294 [Cymbomonas tetramitiformis] diamond 174 44.3 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
32175477 32175477 PRJNA951412_P_NODE_1518_length_365_cov_1.589041_g1433_i0 PRJNA951412 1518 365 1.589041 5.79999965 Micromonas commoda 296587 Plants Plants 111 1.04e-25   NR XP_002501423.1 296587 g1433 i0 43.8 1.97260273972603 121 68 99.5 0 364 2 91 211 XP_002501423.1 monovalent Cation:Proton antiporter-1 family [Micromonas commoda] diamond 720 111 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;